| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2245136 = | 60 (0.970) | 4 (0.070) | 4/248 | NT | 7.3% | coding (682/972 nt) | dusC | tRNA‑dihydrouridine synthase DusC |
| ? | NC_002947 | 2245186 = | 46 (0.800) | coding (732/972 nt) | dusC | tRNA‑dihydrouridine synthase DusC | |||||
CTTCATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCCTGGGCCTGGCGCCAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGGTTGATAGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2245288‑2245136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgcgaCTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGATGAAGCAGTGGCTGGCGATGCTGACTCGCAGTTACCCTGAAGCGGTGGT > NC_002947/2245186‑2245332 CTTCATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCCTGGGCCTGGCGCCAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGGTTGATAGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGC > 1:150772/1‑149CTTCATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCCTGGGCCTGGCGCCAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGGTTGATAGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGC > 3:362168/1‑149CTTCATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCCTGGGCCTGGCGCCAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGGTTGATAGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGC > 8:192179/1‑149 ATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCATGGGCCTGGCGACAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGCTTGATAGTCGCTCCCGTCCCGCGCCGCCGCAATATGCAGCCCCAGGTCACGGCGCGA > 5:340919/1‑149 TCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGAT > 1:271638/1‑149 CGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGA < 3:168852/145‑1 CGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGA > 4:168852/1‑145 AATCTGCAGGCCCAGGTCCGGGCGCGACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGATGAAGCAGTGGCTGGCGATGCTGA < 2:271638/149‑1 GCGACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGATGAAGCAGTGGCTGGCGATGCTGACTCGCAGTTACCCTGAAGCGGTG < 3:378733/149‑1 GACTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGATGAAGCAGTGGCTGGCGATGCTGACTCGCAGTTACCCTGAAGCGGTGGT > 8:296277/1‑149 CTTCATCCGCCCCGGCGCATAACGCGGCGACAATTTGGCCTGGGCCTGGCGCCAGAACTCGCGCAACAGAGGCAACAAGTCATGCCAGCTCATCGGTTGATAGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2245288‑2245136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgcgaCTATCAACCGATGAGCTGGCATGACTTGTTGCCTCTGTTGCGCGAGTTCTGGCGCCAGGCCCAGGCCAAATTGTCGCCGCGTTATGCGCCGGGGCGGATGAAGCAGTGGCTGGCGATGCTGACTCGCAGTTACCCTGAAGCGGTGGT > NC_002947/2245186‑2245332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |