New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2275170 =	66 (1.060)	4 (0.070)	4/250	NT	6.4%	coding (320/1119 nt)	PP_2005	hypothetical protein
	?	NC_002947	2275244 =	55 (0.940)					coding (246/1119 nt)	PP_2005	hypothetical protein

GCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2275246‑2275170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcgGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGG  >  NC_002947/2275244‑2275361                                                                                                                                                                                                     GCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAG                                                >  7:217587/1‑149     GCGCCCAGGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGT                                               <  7:328522/146‑1     GCGCCCAGGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGT                                               >  8:328522/1‑146                                               CGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGG  <  8:217587/149‑1                                                                                                                                                                                                     GCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2275246‑2275170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcgGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGG  >  NC_002947/2275244‑2275361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.