| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2327072 = | 49 (0.790) | 3 (0.050) | 3/252 | NT | 5.9% | coding (232/1962 nt) | PP_2045 | metallo‑beta‑lactamase family protein |
| ? | NC_002947 | 2327118 = | 49 (0.830) | coding (186/1962 nt) | PP_2045 | metallo‑beta‑lactamase family protein | |||||
CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2327223‑2327072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcccGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGG > NC_002947/2327118‑2327263 CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG > 1:349032/1‑149CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG > 2:278856/1‑149CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGCTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG > 4:94371/1‑149 ACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGC < 6:290329/149‑1 CCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTG < 1:223611/146‑1 CCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTG > 2:223611/1‑146 ACGGGACAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTATTCGACGCGATCGTCGAAAGCCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCgg > 4:286910/1‑147 GGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCC > 3:142763/1‑145 GGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCC < 4:142763/145‑1 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGG > 8:93841/1‑149 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGG < 3:11084/147‑1 CCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGG > 4:338982/1‑149 CCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGG > 6:293105/1‑149 CGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCA < 5:156696/72‑1 CGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCA > 6:156696/1‑72 CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2327223‑2327072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcccGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGG > NC_002947/2327118‑2327263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |