New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2348333 =66 (1.060)5 (0.080) 4/256 NT 7.4% coding (540/3084 nt) PP_2065 multidrug RND transporter
?NC_002947 2348382 = 61 (1.020)coding (589/3084 nt) PP_2065 multidrug RND transporter

TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2348485‑2348333
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT  >  NC_002947/2348382‑2348527
                                                                                                                                                                                                                                                                                                           
TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCTGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAG                                                                                                                                                        <  7:242647/149‑1
  CACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGC                                                                                                                                                      >  4:305468/1‑149
  CACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGC                                                                                                                                                      >  6:236161/1‑149
   ACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCG                                                                                                                                                     >  7:364796/1‑149
    CCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC                                                                                                                                                    <  2:63674/149‑1
    CCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC                                                                                                                                                    >  6:73889/1‑149
                                                                                                     CCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC                                                    >  6:188328/1‑148
                                                                                                           CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCGGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC                                                    <  7:61463/142‑1
                                                                                                           CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCGGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC                                                    >  8:61463/1‑142
                                                                                                           CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCC                                                          >  7:83309/1‑136
                                                                                                           CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCC                                                          <  8:83309/136‑1
                                                                                                                                                    GGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATC    <  5:188328/149‑1
                                                                                                                                                      CGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT  <  6:131711/149‑1
                                                                                                                                                       GCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGT                                               >  1:2610/1‑103
                                                                                                                                                       GCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGT                                               <  2:2610/103‑1
                                                                                                                                                                                                                                                                                                           
TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2348485‑2348333
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT  >  NC_002947/2348382‑2348527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.