New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2348333 = | 66 (1.060) | 5 (0.080) | 4/256 | NT | 7.4% | coding (540/3084 nt) | PP_2065 | multidrug RND transporter |
? | NC_002947 | 2348382 = | 61 (1.020) | coding (589/3084 nt) | PP_2065 | multidrug RND transporter |
TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2348485‑2348333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT > NC_002947/2348382‑2348527 TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCTGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAG < 7:242647/149‑1 CACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGC > 4:305468/1‑149 CACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGC > 6:236161/1‑149 ACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCG > 7:364796/1‑149 CCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC < 2:63674/149‑1 CCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC > 6:73889/1‑149 CCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC > 6:188328/1‑148 CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCGGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC < 7:61463/142‑1 CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCGGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATC > 8:61463/1‑142 CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCC > 7:83309/1‑136 CCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCC < 8:83309/136‑1 GGCGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATC < 5:188328/149‑1 CGCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT < 6:131711/149‑1 GCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGT > 1:2610/1‑103 GCGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGT < 2:2610/103‑1 TCCACCTGGATATCGGCCAGCACGTACTGCCCGCGCACCTGGCCCGGCGTTGCCTGGTAGTTGTTGGCACGTACCGCCTGCGCCACGTCCGCCGCCGTCACCCCGCGCCCGGCCATCTGCTCACTGTCCAACCACAGGCGCATGGCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2348485‑2348333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGGGGTGACGGCGGCGGACGTGGCGCAGGCGGTACGTGCCAACAACTACCAGGCAACGCCGGGCCAGGTGCGCGGGCAGTACGTGCTGGCCGATATCCAGGTGGACACCGACCTGACCCGGGTCGAAGACTTCCGTGAGCTGATCAT > NC_002947/2348382‑2348527 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |