| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2987610 | NA (NA) | 3 (0.050) | 3/252 | NT | NA | coding (789/2991 nt) | PP_2612 | membrane protein |
| ? | NC_002947 | = 2987639 | NA (NA) | coding (760/2991 nt) | PP_2612 | membrane protein | |||||
CCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2987459‑2987610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCG < NC_002947/2987639‑2987494 CCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCATTTGCTCG > 6:65554/1‑149CCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCG > 6:256274/1‑149 GCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC > 4:201296/1‑149 GGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGC > 3:254111/1‑124 GGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGC < 4:254111/124‑1 ggGAAAGTCACGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGGTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGC < 6:289647/147‑1 GAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAA > 5:227750/1‑149 AAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACT < 6:227750/149‑1 TCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGTAGAGCCGCGACTTTCACCA > 6:377285/1‑149 TCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCA > 5:376736/1‑149 CGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCCCCAT > 6:37662/1‑149 CGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCAT > 5:256274/1‑149 GGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATC > 5:336410/1‑149 GGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATC < 5:80835/149‑1 GGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACC < 5:119670/146‑1 GCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCG < 7:78288/149‑1 CCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAG < 2:193367/128‑1 CCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAG > 1:193367/1‑128 CCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2987459‑2987610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAGCACACAAAACCTGCCCAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCG < NC_002947/2987639‑2987494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |