| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3013739 | 63 (1.020) | 6 (0.100) | 4/256 | NT | 9.5% | coding (271/2610 nt) | bcsA | cellulose synthase and translocator subunit |
| ? | NC_002947 | = 3013781 | 54 (0.910) | coding (313/2610 nt) | bcsA | cellulose synthase and translocator subunit | |||||
ACCCGCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3013588‑3013739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGCCTTGCTGTACGCACCTGCGGTTGGCGCCGCAGCAACAACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCC < NC_002947/3013781‑3013642 gagctCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGC < 5:322766/144‑1 CCCGCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCC > 1:215951/1‑149 CCGCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCT < 4:313074/149‑1 CGCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTG < 5:286266/149‑1 CTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGC > 6:322766/1‑143 GGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGG < 3:247447/144‑1 GGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGG > 4:247447/1‑144 TCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGC < 5:119722/112‑1 TCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGC < 5:125031/112‑1 TCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGC > 6:119722/1‑112 TCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTGCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGC > 6:125031/1‑112 atgcaCCTGCGGGCGGCAGGCGCATGCGCACCGCGCCCAATGCGCGGCGGACAGGCCTTGCTGTACGCACCTGCGGTTGGCGCCGCAGCAACCACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCGTGCCC > 1:96561/6‑149 ACCCGCCTGGCAGGCGCTGCTGGCCGAGCGCCAACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCGCAGGTGCGTACAGCAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3013588‑3013739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgCCGCCCGCAGGTGCATGCGCACCGCGCCCAATGCGCGGCGGCCAGGCCTTGCTGTACGCACCTGCGGTTGGCGCCGCAGCAACAACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCC < NC_002947/3013781‑3013642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |