New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3078327 = | 52 (0.840) | 5 (0.080) | 5/256 | NT | 9.3% | coding (939/1410 nt) | PP_2688 | hypothetical protein |
? | NC_002947 | 3078355 = | 48 (0.800) | coding (911/1410 nt) | PP_2688 | hypothetical protein |
CAGGTGGACGTGATCTATCGTCGCCTGGACGACGACTACCTCGACCCGCTGTCCTTCAACCCTGACTCGATGCTGGGCGTACCGGGGCTGATCTCGGTTTACCGCGCCGGCAATGTGGTACTGGCCAACGCCGTCGGCACTGGCGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3078476‑3078327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGC > NC_002947/3078355‑3078498 CAGGTGGACGTGATCTATCGTCGCCTGGACGACGACTACCTCGACCCGCTGTCCTTCAACCCTGACTCGATGCTGGGCGTACCGGGGCTGATCTCGGTTTACCGCGCCGGCAATGTGGTACTGGCCAACGCCGTCGGCACTGGCGTGGC < 4:154878/149‑1 GTGGTACTGGCCAACGCCGTCGGCACTGGCGTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAG < 5:314843/119‑1 GTGGTACTGGCCAACGCCGTCGGCACTGGCGTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAG > 6:314843/1‑119 GTACTGGCCAACGCCGTCGGCACTGGCGTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGG < 3:229390/132‑1 GTACTGGCCAACGCCGTCGGCACTGGCGTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGG > 4:229390/1‑132 TGGCCAACGCCGTCGGCACTGGCGTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACC > 4:220873/1‑149 GGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGC < 3:285332/148‑1 CAGGTGGACGTGATCTATCGTCGCCTGGACGACGACTACCTCGACCCGCTGTCCTTCAACCCTGACTCGATGCTGGGCGTACCGGGGCTGATCTCGGTTTACCGCGCCGGCAATGTGGTACTGGCCAACGCCGTCGGCACTGGCGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3078476‑3078327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGC > NC_002947/3078355‑3078498 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |