New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3284661 =	57 (0.920)	5 (0.080)	5/258	NT	8.0%	coding (155/534 nt)	PP_2886	cytochrome b561
	?	NC_002947	3284704 =	59 (0.980)					coding (112/534 nt)	PP_2886	cytochrome b561

CCACCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3284702‑3284661 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGAGGTTTCATGGCTTGGCTCCGGTGCTGAGCGATTCGCGGCTACGG  >  NC_002947/3284704‑3284851                                                                                                                                                                                                CCACCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGCGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGA                                              <  3:60771/146‑1 CCACCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGCGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGA                                              >  4:60771/1‑146  CACCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGCGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGCACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGT                                                         >  3:136181/1‑134    CCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGCGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGAGGTTT                                         >  1:201573/1‑148           CTGATCAGCCTGCACAAGGCCACCGGGCTGGCGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGAGGTTTCATGGCTT                                 <  2:201573/149‑1                                          CGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGAGGTTTCATGGCTTGGCTCCGGTGCTGAGCGATTCGCGGCTACGG  <  8:1026/149‑1                                                                                                                                                                                                CCACCCGGTGCTGATCAGCCTGCACAAGGCCACCGGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3284702‑3284661 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcGTAGCGACAGGTCGGGGACCATGCTCACGCCGATGAACAGCATGGCCAGAATCAGCACGGCCATCAGCCAGTGCAACAAGCGGGCGAAAGGGTGGAAGGCTTGAGGTTTCATGGCTTGGCTCCGGTGCTGAGCGATTCGCGGCTACGG  >  NC_002947/3284704‑3284851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.