| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3296889 = | 55 (0.890) | 5 (0.080) | 5/254 | NT | 8.8% | intergenic (‑15/‑104) | PP_2898/PP_2899 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 3296931 = | 51 (0.860) | intergenic (‑57/‑62) | PP_2898/PP_2899 | hypothetical protein/hypothetical protein | |||||
CAGGATGATCAGAAGTGAATATTTGAGGCGCTGCACGTGTGTCATCGAATGTTCCTTGCAACATCAGGGGCAAATGGCTCGCAACGAGCCGCGGCAATGATACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3297037‑3296889‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCACTTCTGATCATCCTGGTG > NC_002947/3296931‑3297040 CAGGATGATCAGAAGTGAATATTTGAGGCGCTGCACGTGTGTCATCGAATGTTCCTTGCAACATCAGGGGCAAATGGCTCGCAACGAGCCGCGGCAATGATACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGAC < 6:242631/149‑1 TCCTTGCAACATCAGGGGCAAATGGCTCGCAACGAGCCGCGGCAATGATACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGT > 6:116273/1‑94 TACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGACCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCAC < 5:340861/142‑1 TACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGACCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCAC > 6:340861/1‑142 GGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGACCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTTCCCCTGATGTTGCAAGGAACATTCGATTAAACACGTCCAGCGCCTCAAATATTAACTTCTGATCATCCT > 4:211033/1‑149 CCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGACCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCACTTCTGATCATCCTGGTG > 3:160708/1‑145 CCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGACCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCACTTCTGATCATCCTGGTG < 4:160708/145‑1 CAGGATGATCAGAAGTGAATATTTGAGGCGCTGCACGTGTGTCATCGAATGTTCCTTGCAACATCAGGGGCAAATGGCTCGCAACGAGCCGCGGCAATGATACAACGGTCACCGCCCCCGGCGCTGGATTTCCTGCTGGGTGGGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3297037‑3296889‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgacCGTTGTATCATTGCCGCGGCTCGTTGCGAGCCATTTGCCCCTGATGTTGCAAGGAACATTCGATGACACACGTGCAGCGCCTCAAATATTCACTTCTGATCATCCTGGTG > NC_002947/3296931‑3297040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |