New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3452575 =	62 (1.000)	4 (0.070)	4/246	NT	6.9%	coding (872/2478 nt)	PP_3069	outer membrane autotransporter
	?	NC_002947	3452645 =	50 (0.870)					coding (802/2478 nt)	PP_3069	outer membrane autotransporter

ACGGCACTGCTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3452732‑3452575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggctggcTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTAAGGCCTTTGAGCAGTGCCGTGTCATCACCTGGCCCGGCATCCACGCGCCCGCCAATACGGCCACCGTCCCAG  >  NC_002947/3452645‑3452784                                                                                                                                                                                                                                                                                                            ACGGCACTGCTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAG                                                                                                                                                       >  1:312463/1‑149       CTGCTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCT                                                                                                                                                 <  7:176806/149‑1          CTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTG                                                                                                                                                <  2:18376/147‑1          CTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCT                                                                                                                                                 >  3:186949/1‑146          CTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCT                                                                                                                                                 <  4:186949/146‑1                                             GTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCT                                                                                                                                                 <  7:282591/111‑1                                             GTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCT                                                                                                                                                 >  8:282591/1‑111                                                                                       CAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTAAGGCCTTT                                                                  >  7:87864/1‑148                                                                                          CCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGC                                                                             >  5:361125/1‑134                                                                                          CCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGC                                                                             <  6:361125/134‑1                                                                                                                  TGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTAAGGCCTTTGAGCAGTGCCGTGTCATCACCTGGCCCG                                      <  8:87864/149‑1                                                                                                                                                      CCGGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTAAGGCCTTTGAGCAGTGCCGTGTCATCACCTGGCCCGGCATCCACGCGCCCGCCAATACGGCCACCGTCCCAG  <  3:219731/149‑1                                                                                                                                                        GGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTA                                                                          <  3:52681/75‑1                                                                                                                                                        GGCTGGCTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTA                                                                          >  4:52681/1‑75                                                                                                                                                                                                                                                                                                            ACGGCACTGCTCAAAGGCCTTACGCCCGAGGTGCTGAGTATCACGTTGGACGGCGGCGAAGGTAACGACAGCCTGACGTTCGATGCCAGCCAGCCGGCAGGCGGTGCCCACTATGTGAACTGGGAGCGCGTGGCGCTGAACAACGGCAGCCGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3452732‑3452575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggctggcTGGCATCGAACGTCAGGCTGTCGTTACCTTCGCCGCCGTCCAACGTGATACTCAGCACCTCGGGCGTAAGGCCTTTGAGCAGTGCCGTGTCATCACCTGGCCCGGCATCCACGCGCCCGCCAATACGGCCACCGTCCCAG  >  NC_002947/3452645‑3452784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.