| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3506237 = | 55 (0.890) | 3 (0.050) | 3/254 | NT | 5.6% | coding (110/225 nt) | PP_5574 | hypothetical protein |
| ? | NC_002947 | 3506285 = | 49 (0.830) | coding (62/225 nt) | PP_5574 | hypothetical protein | |||||
CATACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3506390‑3506237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtgTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGTGTATGGGCAAAAGATGGCGCAATGCCATCTCATTCATGACGGCTAA > NC_002947/3506285‑3506431 CATACACCAGAATTACCAAGACCGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGGCTACGCTTGGGGTACGTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCGGTTGACTTCAGGATGGGCCTGGCAG > 4:70876/1‑149CATACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAG > 2:229701/1‑149 TACACCAGAATTACCAAGACCGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGT < 8:203881/149‑1 TACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGT < 3:199853/149‑1 TACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGT < 1:229701/149‑1 TACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGT < 7:102874/149‑1 TACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGT > 1:206984/1‑149 CACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGT < 5:206886/149‑1 ACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTG > 2:42102/1‑149 ACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTG > 3:315359/1‑149 ACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTG > 7:96584/1‑149 ACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGT > 3:298694/1‑148 GTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTGTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCT > 4:317586/1‑149 CACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTGTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGT > 6:160631/1‑149 CCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTGTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGTGTAT > 6:350481/1‑149 GCAGGTGTGTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGTGTATGGGCAAAAGATGGCGCAATGCCATCTCATTCAT < 5:350481/147‑1 TGTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTATAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGTGTATGGGCAAAAGATGGCGCAATGCCATCTCATTCATGACGGCTAA < 5:68698/149‑1 CATACACCAGAATTACCAAGAACGTTCACAGGACACTGTGGTCAATGTTCTACATAGCGCCTACGCTTGGGATACTTGTGACGCTGGGCTTGTGGGCGAAGGGGTACACACCCTGCCAGAAGCTGTTGACTTCAGGATCTGCCTGGCAGGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3506390‑3506237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtgTACCCCTTCGCCCACAAGCCCAGCGTCACAAGTATCCCAAGCGTAGGCGCTATGTAGAACATTGACCACAGTGTCCTGTGAACGTTCTTGGTAATTCTGGTGTATGGGCAAAAGATGGCGCAATGCCATCTCATTCATGACGGCTAA > NC_002947/3506285‑3506431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |