New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3602969	59 (0.950)	4 (0.070)	4/254	NT	6.9%	coding (375/1140 nt)	garK	glycerate kinase
	?	NC_002947	= 3603014	51 (0.860)					coding (420/1140 nt)	garK	glycerate kinase

GGCTGGGGCTGGTTGCCGCAAAGTCGCACCGCAATCATCGAAATGGCCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3602820‑3602969 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTCGAGAGCTGCGGCAATCAGTTCACCGGTACCCCAGGTGCTGCTGCGGCAAGCATCGCGTTGGCCTGTTGGCACCTGTTGCAGGCCACTGGCCTGG  <  NC_002947/3603014‑3602867                                                                                                                                                                                                                                                                                                            GGCTGGGGCTGGTTGCCGCAAAGTCGCACCGCAATCATCGAAATGGCCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGG                                                                                                                                                       >  3:359844/1‑149  GCTGGGGCTGGTTGCCGCAAAGTCGCACCGCAATCATCGAAATGGCCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGC                                                                                                                                                      >  5:190990/1‑149                             CCGCAATCATCGAAATGGCCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGCATCGTTGGTGGCGCTGCCGCCGATGGC                                                                                                                           >  1:292568/1‑149                                               CCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGCATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGC                                                                                                         >  5:121675/1‑149                                                     CCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGCATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCTGGC                                                                                                   <  2:292568/149‑1                                                        GTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGCATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTC                                                                                                <  6:121675/149‑1                                                                                                                                                    GGCATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTCGAGAGCTGCGGCAATCAGTTCACCGGTACCCCAGGTGCTGCTGCGGCAAGCATCGCGTTGGCCTGTTGGCACCTGTTGCAGGCCACTGGCCT    <  7:247461/149‑1                                                                                                                                                     GCATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTCGAGAGCTGCGGCAATCAGTTCACCGGTACCCCAGGTGCTGCTGCGGCAAGCATCGCGTTGGCCTGTTGGCACCTGTTGCAGGCCACTGGCCTG   >  6:31228/1‑149                                                                                                                                                      CATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTCGAGAGCTGCGGCAATCAGTTCACCGGTACCCCAGGTGCTGCTGCGGCAAGCATCGCGTTGGCCTGTTGGCACCTGTTGCAGGCCACTGGCCTGG  <  1:172645/149‑1                                                                                                                                                                                                                                                                                                            GGCTGGGGCTGGTTGCCGCAAAGTCGCACCGCAATCATCGAAATGGCCCAGGCCAGTGGCCTGCAACAGGTGCCAACAGGCCAACGCGATGCTTGCCGCAGCAGCACCTGGGGTACCGGTGAACTGATTGCCGCAGCTCTCGACGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3602820‑3602969 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcATCGTTGGTGGCGCTGCCGCCGATGGCCAGCACCACACGCCGGGCGCCGGCGTCGAGAGCTGCGGCAATCAGTTCACCGGTACCCCAGGTGCTGCTGCGGCAAGCATCGCGTTGGCCTGTTGGCACCTGTTGCAGGCCACTGGCCTGG  <  NC_002947/3603014‑3602867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.