| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3706694 = | 55 (0.890) | 3 (0.050) | 3/256 | NT | 5.5% | coding (599/1254 nt) | phaK | phenylacetic acid‑specific porin |
| ? | NC_002947 | 3706728 = | 50 (0.840) | coding (565/1254 nt) | phaK | phenylacetic acid‑specific porin | |||||
ACAACGACACCCGCCTGCTGGCGTCCAGCTTCCAGGGTGGCCTGCTCACCAGTCAGGACCTCGATGGCCTCACCTTCAATGCCGGACGCCTGACCAAGGCCAACCTGCGTGACTCCTCTGGCCGCGACGACATCGGCTATGGCGCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3706844‑3706694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAGGTCCTGACTGGTGAGCAGGCCACCCTGGAAGCTGGACGCCAGCAGGCGGGTGTCGTTGTACACCACCACCGGCAGGATCGGCTGCAAG > NC_002947/3706728‑3706873 ACAACGACACCCGCCTGCTGGCGTCCAGCTTCCAGGGTGGCCTGCTCACCAGTCAGGACCTCGATGGCCTCACCTTCAATGCCGGACGCCTGACCAAGGCCAACCTGCGTGACTCCTCTGGCCGCGACGACATCGGCTATGGCGCTGC > 5:67393/1‑148 CAACGACACCCGCCTGCTGGCGTCCAGCTTCCAGGGTGGCCTGCTCACCAGTCAGGACCTCGATGGCCTCACCTTCAATGCCGGACGCCTGACCAAGGCCAACCTGCGTGACTCCTCTGGCCGCGACGACATCGGCTATGGCGCTGCCA < 3:40367/149‑1 TGACTCCTCTGGCCGCGACGACATCGGCTATGGCGCTGCCAGAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAGGTCCTGACTGGTGAGCAGGCCACCCTGGAAGCTGGACGCCAGCAGGCGG > 3:337252/1‑149 CTCTGGCCGCGACGACATCGGCTATGGCGCTGCCAGAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAG > 5:178094/1‑94 CTCTGGCCGCGACGACATCGGCTATGGCGCTGCCAGAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAG < 6:178094/94‑1 CAGAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAGGTCCTGACTGGTGAGCAGGCCACCCTGGAAGCTGGACGCCAGCAGGCGGGTGTCGTTGTACACCACCACCGGCAGGATCGGCTTCAAG < 8:118191/149‑1 ACAACGACACCCGCCTGCTGGCGTCCAGCTTCCAGGGTGGCCTGCTCACCAGTCAGGACCTCGATGGCCTCACCTTCAATGCCGGACGCCTGACCAAGGCCAACCTGCGTGACTCCTCTGGCCGCGACGACATCGGCTATGGCGCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3706844‑3706694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagAGGAGTCACGCAGGTTGGCCTTGGTCAGGCGTCCGGCATTGAAGGTGAGGCCATCGAGGTCCTGACTGGTGAGCAGGCCACCCTGGAAGCTGGACGCCAGCAGGCGGGTGTCGTTGTACACCACCACCGGCAGGATCGGCTGCAAG > NC_002947/3706728‑3706873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |