New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3724484 =65 (1.050)3 (0.050) 3/252 NT 5.1% coding (54/927 nt) PP_3290 universal stress protein family protein
?NC_002947 3724528 = 51 (0.870)coding (98/927 nt) PP_3290 universal stress protein family protein

CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3724637‑3724484
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGGCAGC  >  NC_002947/3724528‑3724670
                                                                                                                                                                                                                                                                                                         
CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAG                                                                                                                                                      <  2:239272/149‑1
 TGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGC                                                                                                                                                     >  1:14037/1‑149
 TGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGC                                                                                                                                                     >  3:268480/1‑149
   AGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGG                                                                                                                                                   >  2:380034/1‑149
      GCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCG                                                                                                                                                 >  8:318143/1‑148
                                                                                                           TGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGC                                                                                            <  5:206148/100‑1
                                                                                                           TGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGC                                                                                            >  6:206148/1‑100
                                                                                                             GCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGC                                         >  6:221433/1‑149
                                                                                                                                                   AGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGGCAG   <  6:17087/149‑1
                                                                                                                                                    GCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGGCAGC  <  4:329901/149‑1
                                                                                                                                                    GCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGG      <  5:64746/145‑1
                                                                                                                                                    GCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGG      >  6:64746/1‑145
                                                                                                                                                        CGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGG      <  1:2899/141‑1
                                                                                                                                                        CGCCAGCGTGCATGTGCTGGGCTTGTTAGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGG      >  2:2899/1‑141
                                                                                                                                                                                                                                                                                                         
CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3724637‑3724484
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCAGTACCAGCATTATCGCGCTCAGTTGACGGGACTGGTCGAGCGGCATCGCGGCAGC  >  NC_002947/3724528‑3724670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.