| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3769305 | 67 (1.080) | 4 (0.070) | 4/250 | NT | 6.3% | coding (892/2187 nt) | PP_3330 | ferric siderophore receptor |
| ? | NC_002947 | = 3769357 | 56 (0.960) | coding (944/2187 nt) | PP_3330 | ferric siderophore receptor | |||||
CGACATCAACGAGAAGCTCTCGCACACGCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3769154‑3769305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgaagCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAGTTGTTGAAACGGTTGTGCTTGTCGATGTGCAAGGTACCGACCAGTGGCTGCAATACCGGTGTGCCCCAGTAAGGGCTGT < NC_002947/3769357‑3769213 CGACATCAACGAGAAGCTCTCGCACACGCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTC > 2:49518/1‑148CGACATCAACGAGAAGCTCTCGCACACGCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTC < 3:61336/148‑1CGACATCAACGAGAAGCTCTCGCACACGCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTC > 4:61336/1‑148 ACATCAACGAGAAGCACTCGCACACGCTCGCCATAGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACATTGCACATCGACAAGCACAACCGTTTCAACAACAACAACGTAGAA > 2:278379/1‑149 aCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCG > 7:75586/2‑122 aCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCG < 8:75586/121‑1 GCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCG > 7:271881/1‑122 GCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCG < 8:271881/122‑1 GCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACC > 6:102040/1‑149 GAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGT > 2:92361/1‑149 CTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTT < 5:102040/149‑1 CTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAG < 1:92361/149‑1 TCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAGTTGTTGAAACGGTTGTGCTTGTCGATGTGCAAGGTACCGACCAGTGGCTGCAATACCGGTGTGCCCCAGTAAGGGCT < 5:80370/149‑1 TCGAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAGTTGTTGAAACGGTTGTGCTTGTCGATGTGCAAGGTACCGACCAGTGGCTGCAATACCGGTGTGCCCCAGTAAGGGCT > 7:17295/1‑149 GAAGCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAGTTGTTGAAACGGTTGTGCTTGTCGATGTGCAAGGTACCGACCAGTGGCTGCAATACCGGTGTGCCCCAGTAAGGGCTGT > 8:89673/1‑149 CGACATCAACGAGAAGCTCTCGCACACGCTGGCCATCGAATACCTGGAAGAGCAAGAGGACAGCCCTTACTGGGGCACACCGGTATTGCAGCCACTGGTCGGTACCTTGCACATCGACAAGCACAACCGTTTCAACAACTACAACGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3769154‑3769305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgaagCGGTAGTCGGTGATCGAGCGCAGCCACCGGGTGCGCTGCTCGTAGCGACCGTCTTCGACGTTGTAGTTGTTGAAACGGTTGTGCTTGTCGATGTGCAAGGTACCGACCAGTGGCTGCAATACCGGTGTGCCCCAGTAAGGGCTGT < NC_002947/3769357‑3769213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |