| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3951450 = | 65 (1.050) | 5 (0.090) | 4/252 | NT | 7.7% | coding (447/666 nt) | PP_3487 | hypothetical protein |
| ? | NC_002947 | 3951493 = | 58 (0.990) | coding (404/666 nt) | PP_3487 | hypothetical protein | |||||
GATGCCTGCCCGTTGATCACCCGCAAGCTGCGCGAGGTGCGCGAGGCCATGGGGCCAGCGCTGGCCGCCCAGGTGACCTTCGTGTCGATCAGCAGTGACCCGCTGAACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3951602‑3951450‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtgTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATCACCACC > NC_002947/3951493‑3951639 GATGCCTGCCCGTTGATCACCCGCAAGCTGCGCGAGGTGCGCGAGGCCATGGGGCCAGCGCTGGCCGCCCAGGTGACCTTCGTGTCGATCAGCAGTGACCCGCTGAACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGG < 2:195185/149‑1 ATGCCTGCCCGTTGATCACCCGCAAGCTGCGCGAGGTGCGCGAGGCCATGGGGCCAGCGCTGGCCGCCCAGGTGACCTTCGTGTCGATCAGCAGTGACCCGCTGAACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGG < 8:157395/149‑1 CCGCTGAACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGAT > 5:350159/1‑149 ACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGG > 1:306898/1‑149 GACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGG > 2:122544/1‑147 caCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCAACTGGGCGGCCAGCGCTTGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTTATCAACGGGCAGGCt > 4:355876/3‑147 AGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTG < 1:122544/149‑1 GGGGGTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCTTGCGCTTGTAGTTTGTCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATC < 1:127121/148‑1 GTGTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATCACCAC < 1:195185/149‑1 GTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATCACCACC > 7:127435/1‑148 GTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATCACCACC < 8:127435/148‑1 GATGCCTGCCCGTTGATCACCCGCAAGCTGCGCGAGGTGCGCGAGGCCATGGGGCCAGCGCTGGCCGCCCAGGTGACCTTCGTGTCGATCAGCAGTGACCCGCTGAACGACACCCCCGAGGCGCTGAAGGCGTTCGCCGCCAAGCAGGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3951602‑3951450‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtgTCGTTCAGCGGGTCACTGCTGATCGACACGAAGGTCACCTGGGCGGCCAGCGCTGGCCCCATGGCCTCGCGCACCTCGCGCAGCTTGCGGGTGATCAACGGGCAGGCATCGGTGCAATGGGTGAAGATCACGTTGAGCATCACCACC > NC_002947/3951493‑3951639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |