| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4069793 | 54 (0.870) | 5 (0.090) | 4/252 | NT | 8.7% | coding (2366/3099 nt) | mdtB | multidrug transporter membrane protein |
| ? | NC_002947 | = 4069841 | 54 (0.920) | coding (2318/3099 nt) | mdtB | multidrug transporter membrane protein | |||||
ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4069642‑4069793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatccACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGC < NC_002947/4069841‑4069696 ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGA > 1:55434/1‑149ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGA < 4:184184/149‑1 CCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATC > 5:301140/1‑149 CCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGAGGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGC > 4:61533/1‑149 CTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGG > 7:358804/1‑149 AGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGA < 8:358804/149‑1 CGACGCGCCGTGGGCCAGGTTGAACGACAATGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGC < 8:181565/149‑1 CGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGC < 3:61533/149‑1 TCGATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGC > 1:138629/1‑148 ATCCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGG > 6:232913/1‑149 CCACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGC > 1:258918/1‑148 ACCCAGCGGCATGCCGATGTCCTTCTGCACCTGCTCGATCACCTGCACGGCTTCGCCCAGCGACGCGCCGTGGGCCAGGTTGAACGACAAGGTCACCGCCGGGAACTGGCCGATGTGGGAAATAGCCAGCTGCGCTTGACGCTGCTCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4069642‑4069793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatccACGTCAAGGCCACCGATGGCGGCCAGGTGCGCCTTTCGGCGCTGGCGCGGATCGAGCAGCGTCAAGCGCAGCTGGCTATTTCCCACATCGGCCAGTTCCCGGCGGTGACCTTGTCGTTCAACCTGGCCCACGGCGCGTCGCTGGGC < NC_002947/4069841‑4069696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |