New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4127933	50 (0.810)	3 (0.050)	3/252	NT	5.7%	coding (302/651 nt)	htrG	signal transduction protein
	?	NC_002947	= 4127980	51 (0.870)					coding (349/651 nt)	htrG	signal transduction protein

CAGCGGCCCGACCGACGGGCACCGCATTGTCGGCACGCTCAAGTCCGGGCAGAAGCTGACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4127781‑4127933 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccggTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGTCAGC  <  NC_002947/4127980‑4127835                                                                                                                                                                                                                                                                                                             CAGCGGCCCGACCGACGGGCACCGCATTGTCGGCACGCTCAAGTCCGGGCAGAAGCTGACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGC                                                                                                                                                        <  3:120498/149‑1  AGCGGCCCGACCGACGGGCACCGCATTGTCGGCACGCTCAAGTCCGGGCAGAAGCTGACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCAGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCC                                                                                                                                                       >  6:93807/1‑149     GGCCCGTCCGTCGGGCACCGCATTGTCGGAACGCTCAATTGCGGGCAGAAGCTGACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTTGTGTGGATCGTTAGCAACGACCTGCAGGCAGTGCCCGG                                                                                                                                                    <  8:137039/149‑1                                                           ACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCA                                                                                              <  5:59835/149‑1                                                             CCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCAC                                                                                             >  3:134107/1‑148                                                             CCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCAC                                                                                             <  4:134107/148‑1                                                                                                                                                   TGCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGT      <  2:316181/149‑1                                                                                                                                                    GCCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCTGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGT      >  5:93807/1‑148                                                                                                                                                     CCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGGAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCGCTGGCTGCCGAGCAGGGTCA    <  3:354863/149‑1                                                                                                                                                     CCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGTCA    <  1:3395/149‑1                                                                                                                                                     CCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGTC     <  6:799/148‑1                                                                                                                                                     CCCGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGTC     <  7:253198/148‑1                                                                                                                                                       CGGTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATAGCCCTGGCTGCCGAGCAGGGTCAGC  >  2:353678/1‑149                                                                                                                                                                                                                                                                                                             CAGCGGCCCGACCGACGGGCACCGCATTGTCGGCACGCTCAAGTCCGGGCAGAAGCTGACCCTGCTCGGCAGCCAGGGCAATTACAGCCAGGTGCGCGGGCAGAACGGCGATGTGGTGTGGATCCTAAGCAACGACCTGCAGGCAGTGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4127781‑4127933 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccggTCAGTTCGGTGACCTGGGCATCGAGCAACGGCAGGCGCTCGTTCTGCCCGGGCACTGCCTGCAGGTCGTTGCTTAGGATCCACACCACATCGCCGTTCTGCCCGCGCACCTGGCTGTAATTGCCCTGGCTGCCGAGCAGGGTCAGC  <  NC_002947/4127980‑4127835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.