New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4247728 | 46 (0.740) | 3 (0.050) | 3/250 | NT | 5.3% | coding (189/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
? | NC_002947 | = 4247766 | 65 (1.120) | coding (151/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
CCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4247577‑4247728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccgcCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGG < NC_002947/4247766‑4247622 CCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACC > 2:87629/1‑149 GGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTG < 2:111813/148‑1 TCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTC < 3:13355/98‑1 TCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTC > 4:13355/1‑98 CCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCTGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCT < 7:185849/148‑1 CCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTG < 4:30175/149‑1 CCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGG > 6:223716/1‑149 CCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4247577‑4247728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccgcCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGG < NC_002947/4247766‑4247622 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |