New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4382442	52 (0.840)	3 (0.050)	3/250	NT	5.7%	coding (348/2253 nt)	PP_3857	hypothetical protein
	?	NC_002947	= 4382483	51 (0.880)					coding (307/2253 nt)	PP_3857	hypothetical protein

GTCCACCCGTAGCGGCATACGCGCCCCAAGCTGCAAGCCCCACAGGTTGCGCAACGGCCCCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGACCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4382289‑4382442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaccgcgCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTTGC  <  NC_002947/4382483‑4382339                                                                                                                                                                                                                                                                                                             GTCCACCCGTAGCGGCATACGCGCCCCAAGCTGCAAGCCCCACAAGTTGCGCAACGGCCCCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGA                                                                                                                                                        >  1:274367/1‑149    CACCCGTAGCGGCATACGCGCCCCAAGCTGCAAGCCCCACAGGTTGCGCAACGGCCCCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGACCG                                                                                                                                                     >  2:213391/1‑149                                     GCCCCACAGGTTGCGCAACGGCCCCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGACCGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCT                                                                                                                    >  6:110044/1‑149                                                      actGCCCCTTATGCACCTGGGTATTACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGGCAGCAATGCTGACGCCCTCGAAGACCGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCTGTC                                                                                                   <  4:6292/146‑1                                                            CCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGACCGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAG                                                                                             <  5:110044/149‑1                                                                                                                                                     ACCGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTT    <  4:193682/149‑1                                                                                                                                                     ACCGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTT    <  7:235610/149‑1                                                                                                                                                       CGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTTGC  >  5:242398/1‑149                                                                                                                                                       CGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTTGC  <  5:260414/149‑1                                                                                                                                                       CGCGCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTTGC  <  6:242398/149‑1                                                                                                                                                                                                                                                                                                             GTCCACCCGTAGCGGCATACGCGCCCCAAGCTGCAAGCCCCACAGGTTGCGCAACGGCCCCTTAGGCACCTGGGTAATACCGGTCGCGGTCAAGCGCGCATCCACGGATTTAACCTCGCCTGAGCCAGCAATGCTGACGCCCTCGAAGACCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4382289‑4382442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaccgcgCCCCTCACAGGGCAAGACCTGTACAGGCGCTCAGGTTCCGTCGCGGTCTTCGAGGGCGTCAGCATTGCTGGCTCAGGCGAGGTTAAATCCGTGGATGCGCGCTTGACCGCGACCGGTATTACCCAGGTGCCTAAGGGGCCGTTGC  <  NC_002947/4382483‑4382339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.