| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4473352 = | 58 (0.940) | 4 (0.070) | 3/254 | NT | 7.0% | intergenic (+559/‑108) | PP_3962/PP_3963 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 4473383 = | 51 (0.860) | intergenic (+590/‑77) | PP_3962/PP_3963 | hypothetical protein/hypothetical protein | |||||
GAGCGGTGCCGCCTTGCTGACCAGCTTTCTCTTGATCGTTAGCCATGATCTCGCACCTCGTGTGTTCACACAGAGAGCCTGTGTTTTCTTCGGATGCTGGGAGAGTGCGGGATGCTCCCTTTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4473505‑4473352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGTGAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCAGCAAGGCGGCACCGCTCAAAACAACCCTGGCAATTTT > NC_002947/4473383‑4473525 GAGCGGTGCCGCCTTGCTGACCAGCTTTCTCTTGATCGTTAGCCATGATCTCGCACCTCGTGTGTTCACACAGAGAGCCTGTGTTTTCTTCGGATGCTGGGAGAGTGCGGGATGCTCCCTTTACTTTCGTGCTAGCTGACCGGGTGCGC > 8:190576/1‑149 CTTTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGTGAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCCGCAAGGC > 2:90913/1‑149 TTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGTGAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCAGCAAGGCGG > 3:335399/1‑149 TTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGT > 5:28441/1‑90 TTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGT < 6:28441/90‑1 GTGCGCGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCATCCTAAGAAAACACAGGCTCTCTGTGTGAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCAGCAAGGCGGCACCGCTCAAAACAACCCTGG < 4:335399/147‑1 CGAAAGTAAAGGGAGCATCCCGCACTCTCCCAGCCTCCGAAGAAAACACAGGCTCTCTGTGTTAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCAGCAAGGCGGCACCGCTCAAAACAACCCTGGCAATTTT < 6:233945/149‑1 GAGCGGTGCCGCCTTGCTGACCAGCTTTCTCTTGATCGTTAGCCATGATCTCGCACCTCGTGTGTTCACACAGAGAGCCTGTGTTTTCTTCGGATGCTGGGAGAGTGCGGGATGCTCCCTTTACTTTCGTGCTAGCTGACCGGGTGCGCGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4473505‑4473352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagTAAAGGGAGCATCCCGCACTCTCCCAGCATCCGAAGAAAACACAGGCTCTCTGTGTGAACACACGAGGTGCGAGATCATGGCTAACGATCAAGAGAAAGCTGGTCAGCAAGGCGGCACCGCTCAAAACAACCCTGGCAATTTT > NC_002947/4473383‑4473525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |