New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4510837	69 (1.110)	4 (0.070)	4/252	NT	5.3%	coding (952/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	= 4510858	77 (1.310)					coding (931/1326 nt)	rarA	DNA‑dependent ATPase

GGGGCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4510683‑4510837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgccTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTG  <  NC_002947/4510858‑4510712                                                                                                                                                                                                                                                                                                                GGGGCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGG                                                                                                                                                           >  2:271737/1‑149   GGCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGC                                                                                                                                                         >  4:195332/1‑149    GCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCT                                                                                                                                                        <  4:93976/149‑1    GCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCT                                                                                                                                                        <  5:341805/149‑1      ATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGC                                                                                                                                                      <  8:216727/149‑1         GCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCC                                                                                                                                                     >  6:197872/1‑147                                      CGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCC                                                                                                                       >  2:27334/1‑148                                         GCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGG                                                                                                                   <  1:27334/149‑1                                                   TTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCC                                                                                                                         >  1:152436/1‑133                                                   TTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCC                                                                                                                         <  2:152436/133‑1                                                                                                                                                      GCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGACCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTC      <  6:230487/149‑1                                                                                                                                                        TGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCTAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGC    >  7:261419/1‑149                                                                                                                                                        TGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGC    >  2:117410/1‑149                                                                                                                                                          CCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTG  <  5:230275/149‑1                                                                                                                                                          CCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGC    <  8:319730/147‑1                                                                                                                                                                                                                                                                                                                GGGGCATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4510683‑4510837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgccTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTG  <  NC_002947/4510858‑4510712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.