New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4524977 = | 68 (1.100) | 4 (0.070) | 4/256 | NT | 5.8% | coding (408/441 nt) | PP_4013 | MutT/nudix family protein |
? | NC_002947 | 4525025 = | 64 (1.070) | intergenic (+15/‑45) | PP_4013/mnmA | MutT/nudix family protein/tRNA 2‑thiouridine(34) synthase MnmA |
CCGATTCTATCAAACCCGCGGCGCCGCGTCAGTCGCGTAGCAGGTCGAGGCTGTGCAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4525038‑4524977 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGG > NC_002947/4525025‑4525172 CCGACTCTATCAAACCCGCGGCGCCGCGTCAGTCGCGTAGCAGGTCGAGGCTGTGCAGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTC > 2:329465/1‑149 TCAAACCCGCGGCGCCGCGTCAGTCGCGTAGCAGGTCGAGGCTGTGCAGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGG > 7:285869/1‑148 CCCGCGGCGCCGCGTCAGTCGCGTAGCAGGTCGAGGCTGTGCAGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAACTCCCGCGTCATCGTCGGCATGTC > 4:5359/1‑149 GTAGCAGGTCGAGGCTGTGCAGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTC < 8:285869/149‑1 GGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAG < 8:332263/149‑1 GTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGG < 1:329465/149‑1 CCGATTCTATCAAACCCGCGGCGCCGCGTCAGTCGCGTAGCAGGTCGAGGCTGTGCAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4525038‑4524977 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGG > NC_002947/4525025‑4525172 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |