New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 469323056 (0.900)3 (0.050) 3/258 NT 5.3% coding (1105/2931 nt) PP_4154 class 3 aminotransferase
?NC_002947 = 4693250 53 (0.880)coding (1125/2931 nt) PP_4154 class 3 aminotransferase

ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAAATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4693081‑4693230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG  <  NC_002947/4693250‑4693220
                                                                                                                                                                                      
ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAAATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCC                                  >  1:112498/1‑149
 CCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAAGATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCC                                  >  1:85270/1‑149
                                 CCCACGAATGGGAAATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG  <  8:183089/148‑1
                                                                         CTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACA      >  5:299083/1‑105
                                                                         CTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACA      <  6:299083/105‑1
                                                                                                                                                                                      
ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAAATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4693081‑4693230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG  <  NC_002947/4693250‑4693220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.