New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4693230 | 56 (0.900) | 3 (0.050) | 3/258 | NT | 5.3% | coding (1105/2931 nt) | PP_4154 | class 3 aminotransferase |
? | NC_002947 | = 4693250 | 53 (0.880) | coding (1125/2931 nt) | PP_4154 | class 3 aminotransferase |
ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAA‑ATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4693081‑4693230 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG < NC_002947/4693250‑4693220 ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAA‑ATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCC > 1:112498/1‑149 CCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAAGATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCC > 1:85270/1‑149 CCCACGAATGGGAA‑ATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG < 8:183089/148‑1 CTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACA > 5:299083/1‑105 CTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCCGGCCAGCTCGGGGAGCAGGGGGGCACA < 6:299083/105‑1 ACCCGGGCAACCAGTACACCCGCGACAACATTGCCCACGAATGGGAA‑ATTTTCGACACGGCCACCGCCGTGCCTTTCGCCCTGATGGAGGCGGCCATTCTGCAGGCTGCGGGCCTGCAACCCGCGGCGCCGGACTGGAACGACTGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4693081‑4693230 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccGGCCAGCTCGGGGAGCAGGGGGGCACAGTCG < NC_002947/4693250‑4693220 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |