New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4695725	53 (0.850)	3 (0.050)	3/252	NT	5.1%	coding (559/1224 nt)	PP_4155	amine oxidase
	?	NC_002947	= 4695767	62 (1.060)					coding (517/1224 nt)	PP_4155	amine oxidase

CCCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4695571‑4695725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccgGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTGGAA  <  NC_002947/4695767‑4695621                                                                                                                                                                                                                                                                                                                CCCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTG                                                                                                                                                           >  6:177636/1‑149  CCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGT                                                                                                                                                          >  5:17700/1‑149   ctaTTCATCGAAGGCACTGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGTGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTT                                                                                                                                                         <  7:147604/146‑1     CTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGC                                                                                                                                                       >  8:313615/1‑149       TCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCC                                                                                                                                                      >  3:320325/1‑148        CATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGC                                                                                                                                                       <  5:87763/146‑1        CATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGC                                                                                                                                                       <  6:372974/146‑1                                                           CAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAAC                                                                                                 <  7:313615/149‑1                                                                                ACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAA                                                                                                  <  4:142101/127‑1                                                                                ACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAA                                                                                                  >  3:142101/1‑127                                                                                                                                                     GTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTAC       <  3:206817/149‑1                                                                                                                                                     GTTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTAC       >  8:152165/1‑149                                                                                                                                                      TTGCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACT      <  2:75820/149‑1                                                                                                                                                        GCCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTG     <  7:152165/148‑1                                                                                                                                                         CCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTGGA   <  6:258489/149‑1                                                                                                                                                         CCGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTGG    <  4:6831/148‑1                                                                                                                                                          CGGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTGGAA  <  4:183516/149‑1                                                                                                                                                                                                                                                                                                                CCCTCTTCATCCAAGGCACAGGCCGACAGTTGCTCGACGGGCAAACACGCTTCCAGTACAAGGTTGGCGTCGATGGCGAACTGCGTGGCACGCGCGAGCGCGGGGTCGAGTGTGGCCATGTAGCCATCGATCGCGTCAGACAAAGGTTGTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4695571‑4695725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccgGATATCGACGCCGCCTGGGATGCCTTGACCAGGCGTCTCGATCGGCAACAACCTTTGTCTGACGCGATCGATGGCTACATGGCCACACTCGACCCCGCGCTCGCGCGTGCCACGCAGTTCGCCATCGACGCCAACCTTGTACTGGAA  <  NC_002947/4695767‑4695621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.