| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4705453 | 53 (0.850) | 4 (0.070) | 4/254 | NT | 7.1% | coding (1039/1053 nt) | PP_4162 | membrane protein |
| ? | NC_002947 | = 4705500 | 54 (0.910) | coding (992/1053 nt) | PP_4162 | membrane protein | |||||
GGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4705301‑4705453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAACAATAAGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGTTACAGGCAGACCACAACGCTGATTTTTACGCATTCTTTATA < NC_002947/4705500‑4705355 GGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCCCGGGCTTGCCCGCGAAAGGGCCGTTTCAGGCTTTTTGTTGTG > 4:197509/1‑149GGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGAGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTAGCGGGCTTGCCCGCGAAAGGGCAGTTACAGGCTTATTTTTGTG > 7:61421/1‑149 GAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGTAGGCTACAGCCTGCTGCTGGACTGGAG > 7:204941/1‑149 TAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGC < 8:204941/148‑1 GGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAA > 1:58745/1‑112 GGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAA < 2:58745/112‑1 TGGCGGTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAACAATAAGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGTTACAGGCAGACCACAACGCTGATTTTTACGCATTCTT > 6:115216/1‑148 CGGTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAACAATAAGCCTGTAACGGCCCTTTCGCTGGCAAGCCCGCGAAGAGGCCGTTACAGGCAGACCACAACGCTGATTTTTACGCATTCTTTATA < 7:249677/149‑1 GGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4705301‑4705453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggTAGGCTACAGCCTGCTGCTGGACTGGAGCCGTAACGCGGCGCAGCAGCCGCCACAACAATAAGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGTTACAGGCAGACCACAACGCTGATTTTTACGCATTCTTTATA < NC_002947/4705500‑4705355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |