New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4712124 =	55 (0.890)	6 (0.100)	5/254	NT	10.0%	coding (356/2115 nt)	PP_4171	hypothetical protein
	?	NC_002947	4712160 =	55 (0.930)					coding (392/2115 nt)	PP_4171	hypothetical protein

TCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4712166‑4712124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaTGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAGGAC  >  NC_002947/4712160‑4712305                                                                                                                                                                                               TCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGCTGGCGGTGGTCAACATCCTCACCCGCACACCCGCCGA                                          >  3:233015/1‑149    TCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACcg                                       >  8:114806/1‑147      CATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGC                                      >  1:336063/1‑148      CATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGC                                      >  5:171037/1‑148        TGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCAT                                   >  2:33968/1‑149            CAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTA                               <  6:171037/149‑1                                         CCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAGGAC  >  5:387545/1‑149                                                                                                                                                                                               TCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4712166‑4712124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaTGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAGGAC  >  NC_002947/4712160‑4712305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.