| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4767220 | 73 (1.180) | 4 (0.070) | 4/254 | NT | 5.2% | coding (1873/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
| ? | NC_002947 | = 4767245 | 76 (1.280) | coding (1898/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA | |||||
ACCACCACTCGGTCTACGCCAGCTACACCGATATCTTCATGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4767068‑4767220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTGGCGTTGAGTGCGCCGTCGAAGTACTCGCCCTTGATGCCGATCTCGTAGTTCTTGCCTTCGATTGGGCGGATGATGGAGCGGTCACGCGCCAGTTCCGATTGCGGCATG < NC_002947/4767245‑4767105 ACCACCACTCGGTCTACGCCAGCTACACCGATATCTTCATGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGC < 2:163895/149‑1 CCACCACTCGGTCTACGCCAGCTACACCGATATCTTCATGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTCCTTCGACGGCGCACTCAACGCCAGCG > 6:109449/1‑149 TGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGGTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTG > 3:305011/1‑147 TGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGGTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTG < 4:305011/147‑1 GCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAG > 5:237616/1‑108 GCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAG < 6:237616/108‑1 CAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGGTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTGGCG < 7:364704/145‑1 CAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGGTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTGGCG > 8:364704/1‑145 GCGCGGTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTGGCGTTGAGTGCGCCGTCGAAGTACTCGCCCTTGATGCCGATCTCGTAGTTCTTGCCTTCGATTGGGCGGATGATGGAGCGGTCACGCGCCAGTTCCGATTGCGGCATG > 4:334239/1‑147 ACCACCACTCGGTCTACGCCAGCTACACCGATATCTTCATGCCGCAATCGGAACTGGCGCGTGACCGCTCCATCATCCGCCCAATCGAAGGCAAGAACTACGAGATCGGCATCAAGGGCGAGTACTTCGACGGCGCACTCAACGCCAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4767068‑4767220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggTTTTCCTGGTCGATCTGGAAGATCGCCGCGCTGGCGTTGAGTGCGCCGTCGAAGTACTCGCCCTTGATGCCGATCTCGTAGTTCTTGCCTTCGATTGGGCGGATGATGGAGCGGTCACGCGCCAGTTCCGATTGCGGCATG < NC_002947/4767245‑4767105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |