| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4770603 = | 65 (1.050) | 6 (0.100) | 6/256 | NT | 8.7% | coding (8664/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4770655 = | 64 (1.070) | coding (8612/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
GAGCACGGCAACCCACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4770659‑4770603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAGCACACTGCCGCCGTGGGTCAAT > NC_002947/4770655‑4770801 GAGCACGGCAACCCACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTG > 3:268517/1‑149 ACCCACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTC < 4:268517/149‑1 CCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGC < 1:178355/84‑1 CCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGC > 2:178355/1‑84 CGCCGATGCGCATCTATTGCTTCGGCGGTG‑‑G‑GTTGCCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCA > 7:33717/1‑149 GCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGTGCTCGCGTACCTGCTCGATCAATTGATGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGCCGATGCAGTCCCTGGCAGGTCTGCTCCGCGCTCAACAGC > 2:120072/1‑148 CCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAGCACACTGCCGCCGTGGGTCAA > 8:55653/1‑149 CCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAG < 7:246900/128‑1 CCGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAG > 8:246900/1‑128 CGTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAGCACACTGCCGCCGTGGGTCAAT > 3:61311/1‑149 GAGCACGGCAACCCACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4770659‑4770603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTGCTCGCGTACCTGCTCGATCAATTGCTGCAAGTACACCGGCGGGAACGCTGCGACGCTCACGCCATGGCGATGCAGTGCCTGGCAGGTCTGCTCCGGGGTCCACAGCTCATCGCCGCGCAGCAGCACACTGCCGCCGTGGGTCAAT > NC_002947/4770655‑4770801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |