| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4827419 = | 50 (0.810) | 4 (0.070) | 4/252 | NT | 8.0% | coding (3771/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4827495 = | 45 (0.770) | coding (3695/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
TGTCGATTACCCTGCCGAACGCCTGGCCTACATGCTGGCCGACTGCGACGCCCGTTTGCTACTGAGCCACAGCAGCCTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4827572‑4827419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAATCGACATCCAGCGGCACGTAGGCACCGCCGGCCTTGAGAATGGCTAGCAGGCCGACCAGCAATTGCGGTGAG > NC_002947/4827495‑4827638 TGTCGATTACCCTGCCGAACGCCTGGCCTACATGCTGGCCGACTGCGACGCCCGTTTGCTACTGAGCCACAGCAGCCTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGC > 8:122451/1‑149 GTCGATTACCCTGCCGAACGCCTGGCCTACATGCTGGCCGACTGCGACGCCCGTTTGCTACTGAGCCACAGCAGCCTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCC > 1:268122/1‑149 ATTACCCTGCCGAACGCCTGGCCTACATGCTGGCCGACTGCGACGCCCGTTTGCTACTGAGCCACAGCAGCCTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGC < 2:268122/149‑1 CTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGG < 5:151859/146‑1 CTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGG > 6:151859/1‑146 GCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAAT > 5:368461/1‑149 GCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAATCGACATCCAGCGGCACGTAGGCACCGCCGGCCTTGAGAA < 6:368461/148‑1 CCCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAATCGACATCCAGCGGCACGTAGGCACCGCCGGCCTTGAGAATGGCTAGCAGGCCGACCAGCAATTGCGGTGA < 8:329422/149‑1 CCAGCAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAATCGACATCCAGCGGCACGTAGGCACCGCCGGCCTTGAGAATGGCTAGCAGGCCGACCAGCAATTGTGGTGAG > 4:366807/1‑149 TGTCGATTACCCTGCCGAACGCCTGGCCTACATGCTGGCCGACTGCGACGCCCGTTTGCTACTGAGCCACAGCAGCCTGCTGGGCAAGCTGCCGCAGGTCGACGGTGTCAGCGCCATTGCCCTCGACCAGTTGCACCTGGACAGCTGGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4827572‑4827419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcAGGCTGCTGTGGCTCAGTAGCAAACGGGCGTCGCAGTCGGCCAGCATGTAGGCCAGGCGTTCGGCAGGGTAATCGACATCCAGCGGCACGTAGGCACCGCCGGCCTTGAGAATGGCTAGCAGGCCGACCAGCAATTGCGGTGAG > NC_002947/4827495‑4827638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |