| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4832708 = | 50 (0.810) | 3 (0.050) | 3/250 | NT | 5.8% | coding (483/1014 nt) | pvdY | hydroxyproline acetylase |
| ? | NC_002947 | 4832757 = | 51 (0.880) | coding (434/1014 nt) | pvdY | hydroxyproline acetylase | |||||
CGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4832813‑4832708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgggcGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA > NC_002947/4832757‑4832904 CGGTGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTT > 7:207634/1‑102CGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTT < 8:207634/102‑1 CGCCCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTTGGGCGCCCGGCGCGGGTGGCGCTTGCCGTTGCGGCTCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGca > 7:219065/1‑146 CCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTTGGGCGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGT > 8:130437/1‑149 CCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTTGGGCGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCG < 7:130437/149‑1 GGGCGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAG > 2:252215/1‑147 CGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA < 7:210301/149‑1 CGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAG > 1:262585/1‑147 CGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCACGGCAACCGAATCGCCCAGCCACGGCTGCGGCAGTTGCTAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAG > 5:106871/1‑147 CGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGCCGCGGGGCGAAGTGTACCGGCGCTTCGATGCGCGCTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4832813‑4832708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgggcGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA > NC_002947/4832757‑4832904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |