| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4996513 = | 90 (1.450) | 5 (0.090) | 4/248 | NT | 6.1% | coding (903/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 4996571 = | 69 (1.190) | coding (961/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase | |||||
CCACCACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4996667‑4996513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcccagGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAGGGCCTGGACTGCATCGTCG > NC_002947/4996571‑4996718 CCACCACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATG > 2:105821/1‑149 CCACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCC > 5:163665/1‑149 CACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCC > 2:50258/1‑148 CACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCC > 3:201620/1‑148 CCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGT > 2:42598/1‑149 CCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGT > 2:87770/1‑149 CCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGACCCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTG > 7:127152/1‑149 CGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAA < 1:87770/149‑1 CGACGTCGCCGATGGCCCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAG < 1:42598/149‑1 CCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAGGGCCTGGACTGCATCG > 1:230235/1‑149 CCAGGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAGGGCCTGGACTGCATCG > 1:38547/1‑149 GGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAGGGCCTGGACTGCATCGTCG < 3:108213/149‑1 CCACCACCACTTCCGGGTCGGTAAAGCACACGGCGGCAATCGCTGTCGGTTCAAAGCGTCGGGCCTTGCCGGCGATGATTTCGGCGACCATCTCGCCCTGGGCCATGGCCCGGTGCGCCAGCATCGGTTCGCCAGCGACGTCGCCGATGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4996667‑4996513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcccagGGCGAGATGGTCGCCGAAATCATCGCCGGCAAGGCCCGACGCTTTGAACCGACAGCGATTGCCGCCGTGTGCTTTACCGACCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAAGCCAGCCAGCAGGGCCTGGACTGCATCGTCG > NC_002947/4996571‑4996718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |