New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5341779 =	70 (1.130)	4 (0.070)	4/254	NT	5.6%	coding (89/864 nt)	panC	pantothenate synthetase
	?	NC_002947	5341828 =	69 (1.170)					coding (138/864 nt)	panC	pantothenate synthetase

CGCTCCTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5341932‑5341779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGGTG  >  NC_002947/5341828‑5341975                                                                                                                                                                                                                                                                                                                CGCTCCTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTT                                                                                                                                                           <  2:197730/149‑1  GCTCCTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTG                                                                                                                                                          >  5:329547/1‑149   CTCCTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGC                                                                                                                                                         <  4:111702/149‑1      CTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCA                                                                                                                                                      >  5:357632/1‑149      CTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCC                                                                                                                                                       <  6:338434/148‑1                                                            CTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGC                                                                                                                                                         <  1:208494/92‑1                                                            CTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGC                                                                                                                                                         >  2:208494/1‑92                                                                                                        GCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGAC                                                     >  5:105677/1‑148                                                                                                          TGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAG                                                  >  2:40355/1‑149                                                                                                                GCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGC                                            <  1:40355/149‑1                                                                                                                                              TGCAGGTTGCCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTT               <  6:105677/148‑1                                                                                                                                                     TGCCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCACCCTGCTGTTCGCACCCg       >  8:320057/1‑148                                                                                                                                                       CCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACG     >  7:45177/1‑149                                                                                                                                                       CCCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGCTCGCACCCAC      <  3:381711/148‑1                                                                                                                                                        CCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGG    >  5:73779/1‑149                                                                                                                                                        CCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGG    >  7:279582/1‑149                                                                                                                                                        CCAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGG    >  1:37734/1‑149                                                                                                                                                         CAGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGGT   <  3:230605/149‑1                                                                                                                                                          AGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGGTG  <  6:286949/149‑1                                                                                                                                                                                                                                                                                                                CGCTCCTGGTCGGCTGCCAGGGTGCGTGGGTATTTGTCGAGGTCTTCGTTGGCGCCGAACTGCAGCGGGTTGACGAAGATACTGGCGACCACGAAGTCGGCGCGCTGGGCAGCCTTGGTCACCAAGGCCGCATGGCCGCTGTGCAGGTTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5341932‑5341779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaGCGCGCCGACTTCGTGGTCGCCAGTATCTTCGTCAACCCGCTGCAGTTCGGCGCCAACGAAGACCTCGACAAATACCCACGCACCCTGGCAGCCGACCAGGAGCGCCTGGTGCAGGCCGGCTGCAACCTGCTGTTCGCACCCACGGTG  >  NC_002947/5341828‑5341975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.