New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5417918 | 64 (1.030) | 5 (0.080) | 5/254 | NT | 7.6% | coding (1153/1368 nt) | PP_4758 | MFS transporter |
? | NC_002947 | = 5417951 | 61 (1.030) | coding (1120/1368 nt) | PP_4758 | MFS transporter |
TGCGTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5417768‑5417918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGACTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGTG < NC_002947/5417951‑5417808 TGCGTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGG < 6:163312/149‑1 GTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGCCCGAGTTGATCAGGGC > 6:146369/1‑148 GTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGT‑GGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGC < 7:302455/147‑1 GTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGT‑GGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGC > 8:302455/1‑147 TACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTA > 3:329682/1‑149 CACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCT > 6:52746/1‑149 ACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTG < 5:52746/149‑1 CCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTTGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGA < 5:204287/149‑1 CGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGAT < 1:370505/149‑1 GCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATC < 4:329682/149‑1 CAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGACTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGT < 3:30067/149‑1 CAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGACTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGT < 4:372889/149‑1 CAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGACTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGT > 7:68582/1‑149 AGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGCCTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGTG > 8:162939/1‑149 TGCGTACGAAGAAGATGGCAATCGCCGCCAGCACCGAGGTCACCGCCAGGCCGTACAGCCCGCCCTGGATCGAGCCAGTCTGCTGCTCCAGCAAGCCGAAGGTGGTGGGGGCAACGAAACCGCCGAGGTTGCCGACCGAGTTGATCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5417768‑5417918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGATCAACTCGGTCGGCAACCTCGGCGGTTTCGTTGCCCCCACCACCTTCGGCTTGCTGGAGCAGCAGACTGGCTCGATCCAGGGCGGGCTGTACGGCCTGGCGGTG < NC_002947/5417951‑5417808 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |