| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5499029 = | 67 (1.080) | 4 (0.070) | 4/258 | NT | 5.8% | coding (898/1095 nt) | cbiD | cobalt‑precorrin‑6A synthase |
| ? | NC_002947 | 5499068 = | 65 (1.080) | coding (937/1095 nt) | cbiD | cobalt‑precorrin‑6A synthase | |||||
GCGAACACTTCCACGTGCACCTGCGCCGGCACGACGCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5499180‑5499029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGG > NC_002947/5499068‑5499215 GCGAACACTTCCACGTGCACCTGCGCCGGCACGACGCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTG > 5:199818/1‑149 AACACTTCCACGTGCACCTGCGCCGGCACGACGCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAA > 6:256436/1‑149 GCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAA > 7:245476/1‑117 GCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAA < 8:245476/117‑1 GCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAG > 5:65252/1‑149 GCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTG > 1:258364/1‑149 TTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCG > 7:294875/1‑109 TTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCG < 8:294875/109‑1 CAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGC < 2:218315/149‑1 CAAGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGC < 6:138929/149‑1 AGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGTACAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGG < 4:187944/149‑1 AGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGTACAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGG < 4:193865/149‑1 GCGAACACTTCCACGTGCACCTGCGCCGGCACGACGCTACGGGCGAAGGCCAGGGCGTGGGCACACACCGCGTCACCCAGGGCAATGCCGGCCGCATGAGCCAGGGCGAGCGCTTGCTGGCTGGTGTTGGCGCCGCTGATGGCAGCCTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5499180‑5499029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaGCGCTCGCCCTGGCTCATGCGGCCGGCATTGCCCTGGGTGACGCGGTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGG > NC_002947/5499068‑5499215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |