New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5536669 =	55 (0.890)	3 (0.050)	3/262	NT	5.3%	coding (474/828 nt)	nadE	NH(3)‑dependent NAD(+) synthetase
	?	NC_002947	5536710 =	53 (0.870)					coding (515/828 nt)	nadE	NH(3)‑dependent NAD(+) synthetase

TCGGCCGCGTGGTCGGTACCGATCACCAGACCTGCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5536710‑5536669 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAGGCAGTAATGGGCTTCTTTACCAAGTTTGGTGATGGTGCCTGCGACCTCGCGCCGTTGAGTGGGCTGGTGAAGAATCAGGTGCGGGCGATTGCGCGCAGCTTCGGT  >  NC_002947/5536710‑5536816                                                                                                                                                       TCGGCCGCGTGGTCGGTACCGATCACCAGACCTGCGCGGGCGAGGCAGTAATGGGCTTCTTTACCAAGTTTGGTGATGGTGCCTGCGACCTCGCGCCGTTGAGTGGGCTGGTGAAGAATCAGGTGCGGGCGATTGCGCGCAGCTTCGGT  >  3:274536/1‑149  CGGCCGCGTGGTCGGTACCGATCACCAGACCTGCGCGGGCGAGGCAGTAATGGGCTTCTTTACCAAGTTTGGTGATGGTGCCTGCGACCTCGCGCCGTTGAGTGGGCTGGTGAAGAATCAG                             >  1:355820/1‑121  CGGCCGCGTGGTCGGTACCGATCACCAGACCTGCGCGGGCGAGGCAGTAATGGGCTTCTTTACCAAGTTTGGTGATGGTGCCTGCGACCTCGCGCCGTTGAGTGGGCTGGTGAAGAATCAG                             <  2:355820/121‑1                                                                                                                                                       TCGGCCGCGTGGTCGGTACCGATCACCAGACCTGCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5536710‑5536669 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAGGCAGTAATGGGCTTCTTTACCAAGTTTGGTGATGGTGCCTGCGACCTCGCGCCGTTGAGTGGGCTGGTGAAGAATCAGGTGCGGGCGATTGCGCGCAGCTTCGGT  >  NC_002947/5536710‑5536816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.