New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5572514 =	65 (1.050)	5 (0.090)	5/252	NT	7.8%	coding (251/543 nt)	orn	oligoribonuclease
	?	NC_002947	5572567 =	57 (0.970)					coding (198/543 nt)	orn	oligoribonuclease

GACAGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5572668‑5572514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCGGA  >  NC_002947/5572567‑5572711                                                                                                                                                                                                                                                                                                               GACAGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGC                                                                                                                                                          >  2:348381/1‑149  ACAGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCAGGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCC                                                                                                                                                         <  2:327034/149‑1      CGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAG                                                                                                                                                     >  7:82911/1‑149                 CCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAA                                                                                                                                                      >  3:41067/1‑137                 CCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAA                                                                                                                                                      <  4:41067/137‑1                                                                                                  ATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATT                                                         >  7:94065/1‑148                                                                                                    GGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAG                                                      >  1:79398/1‑149                                                                                                            GGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCCGT                                              <  2:79398/149‑1                                                                                                                 TGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGT                                          >  2:64080/1‑148                                                                                                                            GTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGG                               <  1:64080/149‑1                                                                                                                                                      CGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCG    <  6:281895/149‑1                                                                                                                                                        AAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCGGA  >  5:30240/1‑149                                                                                                                                                        AAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGG                               >  7:193028/1‑120                                                                                                                                                        AAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGG                               <  8:193028/120‑1                                                                                                                                                           CACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCG                                                  >  3:183125/1‑98                                                                                                                                                           CACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCG                                                  <  4:183125/98‑1                                                                                                                                                                                                                                                                                                               GACAGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5572668‑5572514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGG‑CCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCGGA  >  NC_002947/5572567‑5572711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.