New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5637262	70 (1.130)	5 (0.080)	4/258	NT	7.0%	coding (1630/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
	?	NC_002947	= 5637286	66 (1.100)					coding (1654/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein

GCAACTGGCCAACCGCCTGCAAGGCGTAACCCTGGCCCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5637111‑5637262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcCCTTGAGCATGCCAAGCTCGGCGTGAACCGCCTGTTCCAGCCAGCGCCAGCCGATCACGCAGTGGCCGAAGGCCTTGAGGTACAAGGCAGAGTTGGCCAGGGCACCAGCGACTTTGCCTTGGGCCAGGTCGCCGAGCAGGGCCAGGG  <  NC_002947/5637286‑5637140                                                                                                                                                                                                                                                                                                             GCAACTGGCCAACCGCCTGCAAGGCGTAACCCTGGCCCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGG                                                                                                                                                        >  1:302920/1‑149   AACTGGCCAACCGCCTGCAAGGCGTAACCCTGGCCCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTT                                                                                                                                                      >  8:129749/1‑149           AACCGCCTGCAAGGCGTAACCCTGGCCCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTCCCTTGAG                                                                                                                                              >  8:141455/1‑149                                   gaCCTGCTGGGCTTCCTTGCGCAACGCAAAGTCGCTGGTGCCCTGGCCATCTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTCCCTTGAGCATGCCATGCTCGGCGTGAAgc                                                                                                                        <  8:295000/145‑3                                     CCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTCCCTTGAGCATGCCAAGCTCGGCGTGAACCGCCT                                                                                                                    <  7:141455/149‑1                                       TGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTCCCTTGAGCATGCCAAGCTCGGCGTGAACCGC                                                                                                                      <  5:65857/145‑1                                       TGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTCCCTTGAGCATGCCAAGCTCGGCGTGAACCGC                                                                                                                      >  6:65857/1‑145                                                                                                                                                     GTTCCCTTGAGCATGCCAAGCTCGGCGTGAACCGCCTGTTCCAGCCAGCGCCAGCCGATCACGCAGTGGCCGAAGGCCTTGAGGTACAAGGCAGAGTTGGCCAGGGCACCAGCGACTTTGCCTTGGGCCAGGTCGCCGAGCAGGGCCAG    >  6:230739/1‑149                                                                                                                                                        CCCTTGAGCATGCCAAGCTCGGCGTGAACCGCCTGTTCCAGCCAGCGCCAGCCGATCACGCAGTGGCCGAAGGCCTTGAGGTACAAGGCAGAGTTGGCCAGGGCACCAGCGACTTTGCCTTGGGCCAGGTCGCCGAGCAGGGNCAGGG  <  7:361517/148‑1                                                                                                                                                                                                                                                                                                             GCAACTGGCCAACCGCCTGCAAGGCGTAACCCTGGCCCTGCTCGGCGACCTGGCCCAAGGCAAAGTCGCTGGTGCCCTGGCCAACTCTGCCTTGTACCTCAAGGCCTTCGGCCACTGCGTGATCGGCTGGCGCTGGCTGGAACAGGCGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5637111‑5637262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcCCTTGAGCATGCCAAGCTCGGCGTGAACCGCCTGTTCCAGCCAGCGCCAGCCGATCACGCAGTGGCCGAAGGCCTTGAGGTACAAGGCAGAGTTGGCCAGGGCACCAGCGACTTTGCCTTGGGCCAGGTCGCCGAGCAGGGCCAGGG  <  NC_002947/5637286‑5637140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.