New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5676105	58 (0.940)	4 (0.070)	4/244	NT	7.2%	intergenic (‑165/+40)	yceJ/PP_4983	iron‑regulated cytochrome b561/amine oxidase
	?	NC_002947	= 5676125	50 (0.880)					intergenic (‑185/+20)	yceJ/PP_4983	iron‑regulated cytochrome b561/amine oxidase

TCCCCGTGAAAGCTATGCACAGACTAACGCGTAACGTATCGAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5675951‑5676105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtgccggccTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGATACGTTACGC  <  NC_002947/5676125‑5675979                                                                                                                                                                                                                                                                                                                TCCCCGTGAAAGCTATGCACTGACTAACGCGTAACGTATCGAAGAAAAGGGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCTTTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGT                                                                                                                                                            <  5:249198/148‑1  CCCCGTGAAAGCTATGCACAGACTAACGCGTAACGTATCGAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGC                                                                                                                                                          >  6:188015/1‑149     CGTGAAAGCTATGCACAGACTAACGCGTAACGTATCGAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGG                                                                                                                                                       <  2:301931/149‑1      GTGAAAGCTATGCACAGACTAACGCGTAACGTATCGAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGC                                                                                                                                                      >  1:261190/1‑149                                         GAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAA                                                                                                                   >  2:67284/1‑149                                               AAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAA                                                                                                             <  1:67284/149‑1                                                               TTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCA                                                                                                                         <  3:171875/121‑1                                                               TTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCA                                                                                                                         >  4:171875/1‑121                                                                                                                                                 CAGTGCCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGAT           <  2:356284/149‑1                                                                                                                                                      CCGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGATACGT       <  3:332794/148‑1                                                                                                                                                       CGGCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTATCCGACTATAGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGAAAATCCAAAGAAATTTTTTACGCTTTTGTTCGATACGTTA     >  2:327695/1‑149                                                                                                                                                         GCCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGATACGTTACG   <  7:189692/149‑1                                                                                                                                                          CCTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGATACGTTACGC  <  8:50869/149‑1                                                                                                                                                                                                                                                                                                                TCCCCGTGAAAGCTATGCACAGACTAACGCGTAACGTATCGAAGAAAAGCGGAAAAAATTGCTTTGGATTATCGAGGAATCCGATATTTATTCTGTTAGCTGACCATTAAGAAAACATTAACGATAGTCGGAGAGTTAGGGTTGCAGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5675951‑5676105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtgccggccTGTTCGCCTGTTCGCCTGAGGGCCGGCACTGCAACCCTAACTCTCCGACTATCGTTAATGTTTTCTTAATGGTCAGCTAACAGAATAAATATCGGATTCCTCGATAATCCAAAGCAATTTTTTCCGCTTTTCTTCGATACGTTACGC  <  NC_002947/5676125‑5675979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.