New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5756153	62 (1.000)	4 (0.070)	4/248	NT	6.1%	coding (1267/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5756219	65 (1.130)					coding (1333/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG

CCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5756001‑5756153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgcagCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCCTGCTCCCAGTTGGT  <  NC_002947/5756219‑5756075                                                                                                                                                                                                                                                                                                            CCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGC                                                                                                                                                       >  4:262378/1‑149   TCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCG                                                                                                                                                      >  8:323359/1‑148    CCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCA                                                                                                                                                    <  4:129554/149‑1    CCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCG                                                                                                                                                      >  5:310643/1‑147    CCAGCCGCGAAGTGCGGATCGGCGACGAGCCACCAGAACTGCTGAACCTGGCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCA                                                                                                                                                    <  7:139612/149‑1     CAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCA                                                                                                                                                    <  2:122854/148‑1     CAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCA                                                                                                                                                    <  4:364147/148‑1                                                                             CAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGC                                                                           >  7:250480/1‑149                                                                                      GCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCA                                                                  <  8:250480/149‑1                                                                                          GCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAG                                                                    >  3:206329/1‑143                                                                                          GCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAG                                                                    <  4:206329/143‑1                                                                                                                                                    GCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCCTGCTCCCAGTTG    <  2:363345/149‑1                                                                                                                                                       CAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCCTGCTCCCAGTTGGT  >  8:141400/1‑148                                                                                                                                                                                                                                                                                                            CCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5756001‑5756153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgcagCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTCGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCCTGCTCCCAGTTGGT  <  NC_002947/5756219‑5756075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.