| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5896614 = | 84 (1.350) | 5 (0.080) | 4/254 | NT | 6.0% | coding (775/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5896653 = | 76 (1.280) | coding (736/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein | |||||
CTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5896762‑5896614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacaGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACCGG > NC_002947/5896653‑5896800 CTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACA < 5:219760/149‑1CTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGAC > 8:350368/1‑148 ACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT > 5:203777/1‑136 ACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGT < 6:203777/136‑1 ctAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGATATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGAC < 4:284660/131‑1 TGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAG > 1:223247/1‑149 TGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGA > 5:30828/1‑144 TGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGA < 6:30828/144‑1 TCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGTCATTGTTG > 5:246356/1‑141 TCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGTCATTGTTG < 6:246356/141‑1 GACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCTTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCA < 3:370537/148‑1 ACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC > 6:51842/1‑149 ACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC < 8:27230/149‑1 ACAGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACC < 8:27231/149‑1 AGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACCGG > 5:284727/1‑149 CTTCGTCAACAATGGCCAGGGCGACGTGTTGCTGGCCTGGGAAAACGAAGCCTTCCTGGCCCTGAAGGAAGACGGTGGTGCCAACAAGTTCGAGATCGTCGTGCCGTCGCTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5896762‑5896614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacaGCGACGGCACGACGATCTCGAACTTGTTGGCACCACCGTCTTCCTTCAGGGCCAGGAAGGCTTCGTTTTCCCAGGCCAGCAACACGTCGCCCTGGCCATTGTTGACGAAGGTGATGGTCGAACCACGGGCGCCGGTATCCAGCACCGG > NC_002947/5896653‑5896800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |