New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6067977 | 61 (0.980) | 5 (0.080) | 5/258 | NT | 7.7% | coding (620/1341 nt) | PP_5322 | metal ion transporter |
? | NC_002947 | = 6068018 | 61 (1.010) | coding (661/1341 nt) | PP_5322 | metal ion transporter |
CCTGTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6067828‑6067977 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACGGCTGGAGTGCAGGATCAGCTTGAGTTCTTCGCGGCTGTAGTGGTGCTCATGGTGCGGGCCAGGCTCGCCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGC < NC_002947/6068018‑6067871 CCTGTTCTACTGGGCGATGTAGCCGGCCATCTACCTGCTCAATCGCCGCTCCAACACCATCCAGCGCATTGCCGGCCACGGCGAGCCTGGGCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCC < 6:37428/149‑1 ACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCGAGGCCAG > 5:118972/1‑149 CCAGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCGTGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCAC < 5:73659/148‑1 CCAGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCGAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACG > 7:195534/1‑149 AGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCGAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACGGC < 8:195534/149‑1 CAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCGAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACGGCTGGAG < 6:118972/149‑1 GAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACGGCTGGAGTGCAGGATCAGCTTGAGTTCTTCGCGGCTGTAGTGGTGCTCATGGTGCGGGCCAGGCTCGCCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGC < 7:306621/149‑1 CCTGTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCCGGCCAGGGCGAGCCTGGCCCGCACCATGAGCACCACTACAGCCGCGAAGAACTCAAGCTGATCCTGCACTCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6067828‑6067977 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgAGGCCAGCACGCGCATGCCTTGGTCGCTTGGGTCCTGGCCACGGCTGGAGTGCAGGATCAGCTTGAGTTCTTCGCGGCTGTAGTGGTGCTCATGGTGCGGGCCAGGCTCGCCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGC < NC_002947/6068018‑6067871 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |