| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6101254 | 87 (1.400) | 5 (0.090) | 3/246 | NT | 5.9% | coding (406/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II |
| ? | NC_002947 | = 6101276 | 78 (1.360) | coding (428/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II | |||||
CAACCCGGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6101097‑6101254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgggcctggCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGT < NC_002947/6101276‑6101129 CAACCCGGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCGTGCGCGAGT > 3:88171/1‑149CAACCCGGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGT > 8:46090/1‑149 CGGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGC < 8:171934/149‑1 CCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCGTGCGCGAGTTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGG < 4:88171/149‑1 CCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGG < 6:104721/149‑1 CCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAA < 3:74413/149‑1 CATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTT < 7:196431/107‑1 CATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTT > 8:196431/1‑107 CAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGG < 7:117540/118‑1 CAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGG > 8:117540/1‑118 GGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTG < 3:42264/82‑1 GGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTG > 4:42264/1‑82 GCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGT > 7:46090/1‑149 CAACCCGGCAGGCATGTGGGTAGGCACCTTCCACGGCCTGGCCCATCGCCTGTTGCGGGCCCACTGGCAGGAAGCGCGGCTGGTGCAGAACTTCCAGATCCTCGACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6101097‑6101254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgggcctggCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTCGAGGATCTGGAAGTTCTGCACCAGCCGCGCTTCCTGCCAGTGGGCCCGCAACAGGCGATGGGCCAGGCCGT < NC_002947/6101276‑6101129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |