New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6118914 | 64 (1.030) | 4 (0.070) | 4/250 | NT | 6.0% | coding (114/1158 nt) | PP_5368 | MFS transporter |
? | NC_002947 | = 6118930 | 66 (1.130) | coding (98/1158 nt) | PP_5368 | MFS transporter |
AGCTGGTGCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6118759‑6118914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgccTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGAGCGCCGGGGTAATTGT < NC_002947/6118930‑6118783 AGCTGGTGCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATAC > 1:250408/1‑149 GTGCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGC < 8:191613/148‑1 TGCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGC < 6:16866/149‑1 GCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGGCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGC > 1:71664/1‑148 CGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCCTGAATGCTTCCGGTGTGGCGCAGGTATGGG < 4:251008/149‑1 CAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCCTGAATGCTTCCGGTGTGGCGCA > 3:138163/1‑97 CAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCCTGAATGCTTCCGGTGTGGCGCA < 4:138163/97‑1 AATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCCTGAATGCTTCCGGTGTGGCGCAG > 2:57592/1‑97 CCTGCGCCTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGA > 3:128929/1‑140 CCTGCGCCTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGA < 4:128929/140‑1 TGCGCCTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGAGCGCCGGGGT > 3:95273/1‑148 GCGCCTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGAGCGCCGGGGTAA > 5:391996/1‑149 CTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGAGCGCCGGGGTAATTGT < 1:343103/149‑1 AGCTGGTGCGAGAGCACCGCAGTGACAATTACCCCGGCGCTCACCACAAAGGCCCGAGCATGGCCGACCAGGCCAATCAGCCAATAACCGGAGCGGGCTCCCACCACCATGCCCAGCGCGTTGGCGGCCATAAGCGCACCACCCCATACCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6118759‑6118914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgccTGAATGCTTCCGGTGTGGCGCAGGTATGGGGTGGTGCGCTTATGGCCGCCAACGCGCTGGGCATGGTGGTGGGAGCCCGCTCCGGTTATTGGCTGATTGGCCTGGTCGGCCATGCTCGGGCCTTTGTGGTGAGCGCCGGGGTAATTGT < NC_002947/6118930‑6118783 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |