New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 40168760 (0.970)8 (0.180)
+GTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCAT
6/190 NT 16.0% intergenic (+214/+215) PP_0334/PP_0335 transposase/glutathione S‑transferase family protein
?NC_002947 4476266 = 58 (0.940)intergenic (‑15/‑161) PP_3966/PP_3967 transposase/MutT/nudix family protein

AGACCGTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCC  >  NC_002947/401541‑401831
                                                                                                                                                  |                                                                                                                                                 
aGACCGTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGtt                                                                                                                                                 <  5:263630/149‑1 (MQ=31)
aGACCGTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgt                                                                                                                                                 <  8:214105‑M1/149‑3 (MQ=255)
    cGTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCaa                                                                                                                                              >  2:237368/1‑148 (MQ=33)
     gTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCaaaa                                                                                                                                            <  3:196135/149‑1 (MQ=35)
     gTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCaaa                                                                                                                                             >  8:236755/1‑148 (MQ=34)
       cGCAGAGCGATGCCTCAGCTCCTACAGGCCTGATTGTGGCCTCATTGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAATCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCaaaa                                                                                                                                            <  5:307397/147‑1 (MQ=11)
        gCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtcc                                                                                                                                         >  7:47159‑M1/1‑139 (MQ=255)
          aGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccgg                                                                                                                                       <  6:285131‑M1/149‑13 (MQ=255)
            aCCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAagcagc                                                                                                                                     <  2:246102/149‑1 (MQ=40)
            aCCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTAGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCCGGTTCCTATGTTCAAAAAagcagc                                                                                                                                     >  7:87574/1‑149 (MQ=255)
              cGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaa                                                                                                                                   >  7:332640‑M1/1‑133 (MQ=255)
              cGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTa                                                                                                                                   <  4:270520/149‑1 (MQ=255)
              cGATGCCTCCGCTCCTACAGACCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaa                                                                                                                                   <  7:120907‑M1/149‑17 (MQ=255)
                aTGCCTCCGCTGCTACAGGCCTGATAGTGGCTTCAATGTAAACGGCACACTGCGAGCTCACGACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAACGCAGCTAGa                                                                                                                                 >  6:343709/1‑149 (MQ=255)
                   ccTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACa                                                                                                                               <  3:163784/148‑1 (MQ=255)
                    cTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAagca                                                                                                                                       <  8:267119/139‑1 (MQ=40)
                    cTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAagca                                                                                                                                       >  7:267119/1‑139 (MQ=40)
                     tCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcacct                                                                                                                            >  6:134379‑M1/1‑126 (MQ=255)
                     tCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAgtg                                                                                                                            >  6:124084/1‑149 (MQ=255)
                         cTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTggg                                                                                                                        >  6:264297/1‑149 (MQ=255)
                            cTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGa                                                                                                                     <  5:264297/149‑1 (MQ=255)
                              aCAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactc                                                                                                                   >  5:180619‑M1/1‑117 (MQ=255)
                              aCAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactc                                                                                                                   >  6:349267‑M1/1‑117 (MQ=255)
                              aCAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGt                                                                                                                   >  5:157344/1‑149 (MQ=255)
                                aGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactc                                                                                                                   >  1:37983‑M1/1‑115 (MQ=255)
                                aGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTc                                                                                                                  >  8:86373/1‑148 (MQ=255)
                                  gCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagc                                                                                                               <  6:180619‑M1/149‑37 (MQ=255)
                                   ccTGATAGTGGCCTCAATGTAAACGGCACACTGCGATCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCcata                                                                                                              <  7:301288/149‑1 (MQ=255)
                                    cTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCcatac                                                                                                             <  2:92863/149‑1 (MQ=255)
                                    cTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCcatac                                                                                                             <  5:10997/149‑1 (MQ=255)
                                      gATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCACGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcatt                                                                                                            >  3:185894‑M1/1‑109 (MQ=255)
                                       aTAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCcatacata                                                                                                          <  5:124084/149‑1 (MQ=255)
                                       aTAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCAAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaaatccagcatt                                                                                                            >  7:361859‑M1/1‑108 (MQ=255)
                                          gTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaaggg                                                                                                       <  8:332640‑M1/149‑45 (MQ=255)
                                          gTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGAc                                                                                                       <  4:374847/149‑1 (MQ=255)
                                                tCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAagca                                                                                                                                       >  5:16409/1‑111 (MQ=255)
                                                tCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAagca                                                                                                                                       <  6:16409/111‑1 (MQ=255)
                                                    tGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggtgatcgcgtc                                                                                             >  4:30135‑M1/1‑95 (MQ=255)
                                                        aaaggCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACAAACATGCAACCGGGTTCCAAAGATCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACATTCTGGTCGacta                                                                                         >  1:122455/4‑146 (MQ=18)
                                                        aaCGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTc                                                                                         >  1:312639/1‑149 (MQ=255)
                                                            gCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCcata                                                                                     <  7:86373/149‑1 (MQ=255)
                                                             cacaCTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCcata                                                                                     >  2:188071/1‑148 (MQ=255)
                                                                       gCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCgg                                                                          >  3:65205/1‑149 (MQ=255)
                                                                         tCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGc                                                                        >  7:101018/1‑149 (MQ=255)
                                                                           accacGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCtt                                                                      >  1:44702/1‑149 (MQ=255)
                                                                           accacGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCtt                                                                      >  1:250175/1‑149 (MQ=255)
                                                                             cacGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGc                                                                    >  1:109974/1‑149 (MQ=255)
                                                                               cGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggcgatcgcgtccgcttaaaaatacgcggacaccatcgc                                                                  <  5:134379‑M1/149‑82 (MQ=255)
                                                                                    ttGGCCAGAAGCAAAAAGCTTCCTGGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGaa                                                             <  1:185718/149‑1 (MQ=255)
                                                                                       gCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAaca                                                           <  4:65205/148‑1 (MQ=255)
                                                                                        ccAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccaccattaagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgc                                                         <  7:348102‑M1/149‑91 (MQ=255)
                                                                                          aGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctg                                                       <  8:47159‑M1/149‑93 (MQ=255)
                                                                                          aGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctg                                                       <  3:30135‑M1/149‑93 (MQ=255)
                                                                                          aGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAAcacaca                                                       <  2:312639/149‑1 (MQ=255)
                                                                                                aaaaaGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGTGGGCTTGCCCGCGAACACACATAATgg                                                 >  1:260808/1‑149 (MQ=255)
                                                                                                 aaaaGCTTCCTCGTATAGTCCTGATACATCGCTGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTTGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGTACACACATAATgtg                                                <  2:250175/149‑3 (MQ=38)
                                                                                                 aaaaGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGTGGGCTTGCCCGCGAACACACATAATggg                                                <  2:260808/149‑1 (MQ=255)
                                                                                                 aaaaGCTTCCTCGAATACGCCTGATACATAGATGCAACGGGTTTCCTATGTTCAAAAAAGCAGCTAGACAGTCTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATggg                                                <  8:87574/149‑1 (MQ=255)
                                                                                                        tCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctgga                                                     <  5:327986‑M1/137‑95 (MQ=255)
                                                                                                        tCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGgtaagcgtccggcgaactcaccttccgaactccagcattaagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctgga                                                     >  6:327986‑M1/1‑43 (MQ=255)
                                                                                                                tAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGt                                                                                          <  4:154626/92‑1 (MQ=255)
                                                                                                                tAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGt                                                                                          >  3:154626/1‑92 (MQ=255)
                                                                                                                   gCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGTGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATACGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAAGCACCGGCTTc                             >  8:204131/1‑149 (MQ=255)
                                                                                                                     cTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATggg                                                <  5:315121/129‑1 (MQ=255)
                                                                                                                     cTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATggg                                                >  6:315121/1‑129 (MQ=255)
                                                                                                                         tACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGgt                       <  2:44702/149‑1 (MQ=255)
                                                                                                                         tACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGgt                       <  1:188071/149‑1 (MQ=255)
                                                                                                                         tACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGgt                       <  8:101018/149‑1 (MQ=255)
                                                                                                                            aTAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGgtgt                     >  5:254943/1‑148 (MQ=255)
                                                                                                                            aTAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGgtgt                     >  1:358763/1‑148 (MQ=255)
                                                                                                                            aTAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGtt                    >  7:333447/1‑149 (MQ=255)
                                                                                                                            aTAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGtt                    >  4:22884/1‑149 (MQ=255)
                                                                                                                            aTAGATGCAACCGGGATCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGCCGAGTCCATACATAGGAGAGGGCTTGACCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCTGTGtt                    >  4:327621/1‑149 (MQ=38)
                                                                                                                                 tGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCgg               <  5:343709/149‑1 (MQ=255)
                                                                                                                                 tGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCgg               <  7:236755/149‑1 (MQ=255)
                                                                                                                                  gCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCggg              >  3:135522/1‑149 (MQ=255)
                                                                                                                                  gCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGAGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCggg              >  1:274687/1‑149 (MQ=255)
                                                                                                                                   cAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGGCCATACATAGGAGCGGGCTTGCCCGCGAACACACAAAATGGGGATGTCAGGCACCGGCTTCGCCGGTGTTCGCgg               <  1:237368/148‑1 (MQ=255)
                                                                                                                                      ccGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACg          >  3:138648/1‑149 (MQ=255)
                                                                                                                                       cGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGc         >  1:160563/1‑149 (MQ=255)
                                                                                                                                         ggTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCcgc                                                                >  3:293912/1‑93 (MQ=255)
                                                                                                                                         ggTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCcgc                                                                <  4:293912/93‑1 (MQ=255)
                                                                                                                                              cTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGcgaa  <  2:358763/149‑4 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
AGACCGTCGCAGACCGATGCCTCCGCTCCTACAGGCCTGATAGTGGCCTCAATGTAAACGGCACACTGCGAGCTCACCACGATGTTGGCCAGAAGCAAAAAGCTTCCTCGAATAGGCCTGATACATAGATGCAACCGGGTTCCTATGTTCAAAAAAGCAGCTAGACAGTGTGGGCGAGTCCATACATAGACAGTGTGGGCGAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCC  >  NC_002947/401541‑401831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.