New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 29376870 (0.000)68 (1.110) 46/262 NT 100% intergenic (+44/+39) PP_2569/PP_2570 MHS family metabolite MFS transporter/transposase
?NC_002947 5545321 = NA (NA)intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

ATCTATTACGGCTTGTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATA  >  NC_002947/2937539‑2937833
                                                                                                                                                    |                                                                                                                                                  
atCTATTACGGCTTGTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCT                                                                                                                                                    >  3:340183‑M1/1‑149 (MQ=255)
     ttACGGCTTGTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTt                                                                                                                                                   <  5:246939‑M1/145‑2 (MQ=255)
        cGGCTTGTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatca                                                                                                                                             <  5:335213‑M1/148‑8 (MQ=255)
              gtgGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaa                                                                                                                                        >  2:313943‑M1/1‑135 (MQ=255)
                     ccGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacc                                                                                                                               >  2:374188‑M1/1‑128 (MQ=255)
                      cGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacc                                                                                                                               >  8:57894‑M1/1‑127 (MQ=255)
                      cGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacc                                                                                                                               <  7:57894‑M1/148‑22 (MQ=255)
                           gTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgt                                                                                                                         >  2:173398‑M1/1‑122 (MQ=255)
                           gTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactg                                                                                                                          <  2:259065‑M1/148‑27 (MQ=255)
                               ttGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctt                                                                                                                     >  3:223034‑M1/1‑118 (MQ=255)
                                 gCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttc                                                                                                                   >  1:157429‑M1/1‑116 (MQ=255)
                                 gCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttcttt                                                                                                                    <  6:164440‑M1/148‑33 (MQ=255)
                                  ccGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttct                                                                                                                  <  1:374188‑M1/149‑35 (MQ=255)
                                    gTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctag                                                                                                                >  1:354358‑M1/1‑113 (MQ=255)
                                      gatgaCAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagc                                                                                                               >  7:165196‑M1/1‑111 (MQ=255)
                                      gatgaCAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagc                                                                                                               >  4:147066‑M1/1‑111 (MQ=255)
                                          aCAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaa                                                                                                           >  3:308407‑M1/1‑107 (MQ=255)
                                           cAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaa                                                                                                          >  3:179293‑M1/1‑106 (MQ=255)
                                               ggTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaaca                                                                                                     <  4:173303‑M1/149‑48 (MQ=255)
                                                gTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacag                                                                                                    <  1:1781‑M1/149‑49 (MQ=255)
                                                     ggggATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaaca                                                                                                     >  2:357978‑M1/1‑96 (MQ=255)
                                                     ggggATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaaca                                                                                                     <  1:357978‑M1/143‑48 (MQ=255)
                                                        gATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgg                                                                                            <  6:99529‑M1/149‑57 (MQ=255)
                                                            ttcttcCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggt                                                                                         >  6:313310‑M1/1‑89 (MQ=255)
                                                               ttcCTGCCTGAGACCAAAGATCGGGAAATCACTCACACCTGAAGGTCGAGTTTGCCAGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactcttcattctagcgaaaaaaacaggaccgcggggtcaat                                                                                     >  3:326220‑M1/1‑86 (MQ=255)
                                                                     cctgAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcg                                                                                 <  7:205581‑M1/147‑68 (MQ=255)
                                                                          gaCCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagt                                                                          <  4:223034‑M1/149‑75 (MQ=255)
                                                                             cAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt                                                                       >  5:159373‑M1/1‑72 (MQ=255)
                                                                              aaaGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacacactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt                                                                       >  8:167434‑M1/1‑71 (MQ=255)
                                                                               aaGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                     <  4:179293‑M1/149‑80 (MQ=255)
                                                                               aaGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca                                                                     >  3:124481‑M1/1‑70 (MQ=255)
                                                                                aGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac                                                                    <  4:340183‑M1/149‑81 (MQ=255)
                                                                                 gATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgtggtcaatggcggcgaagtgtgcact                                                                   >  6:223588‑M1/1‑68 (MQ=255)
                                                                                  aTCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactc                                                                  <  3:81864‑M1/149‑83 (MQ=255)
                                                                                   tCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcattct                                                                 >  3:56976‑M1/1‑66 (MQ=255)
                                                                                     gggATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                <  1:313943‑M1/148‑85 (MQ=255)
                                                                                       gATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttcta                                                             <  1:173398‑M1/149‑88 (MQ=255)
                                                                                        atatCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttcta                                                             >  8:333622‑M1/1‑61 (MQ=255)
                                                                                           tcactcacACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcattcttctatac                                                          <  4:56976‑M1/148‑91 (MQ=255)
                                                                                                     cTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcac                                                  <  6:318678‑M1/146‑99 (MQ=255)
                                                                                                     cTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcac                                                  >  5:318678‑M1/1‑48 (MQ=255)
                                                                                                        aatgtcgAGTTTGCCTGTGCCGGACCCTTCGCTGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctatcgaaaaaaacaggctcgcggggtcaattgcggcgaagtgttcactcttctatacgtggtcacagca                                              <  7:167434‑M1/144‑103 (MQ=255)
                                                                                                            tCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgt                                        >  8:336209‑M1/1‑41 (MQ=255)
                                                                                                            tCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctatctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgt                                        <  1:124513‑M1/149‑109 (MQ=255)
                                                                                                              gAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc                                      <  4:124481‑M1/149‑111 (MQ=255)
                                                                                                              gAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc                                      <  7:333622‑M1/149‑111 (MQ=255)
                                                                                                               aGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgcc                                     <  7:336209‑M1/149‑112 (MQ=255)
                                                                                                                gTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataaaccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttgtatacgtggtcacagcaagctgtgcc                                     >  1:91474‑M1/1‑37 (MQ=255)
                                                                                                                   ttcctgTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgac                                  <  4:122326‑M1/146‑115 (MQ=255)
                                                                                                                      cTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgtgcccg                              >  1:283620‑M1/1‑31 (MQ=255)
                                                                                                                      cTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg                               >  7:229035‑M1/1‑31 (MQ=255)
                                                                                                                      cTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc                                      <  4:150544‑M1/141‑111 (MQ=255)
                                                                                                                      cTGTGCCGGCCCCTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgc                                      >  3:150544‑M1/1‑31 (MQ=255)
                                                                                                                                cccTTCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgcc                     >  6:352232‑M1/1‑21 (MQ=255)
                                                                                                                                   ttCGCGGGTGAACCCGCTtctatcaaacaaaagataacccacaggtctttctagcgaaaaaaccaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgagccgacagggattaacgccgatg                 >  6:374350‑M1/1‑18 (MQ=255)
                                                                                                                                    tCGCGGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgat                  <  6:309737‑M1/147‑131 (MQ=255)
                                                                                                                                     cgcgGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatg                 <  1:213100‑M1/147‑132 (MQ=255)
                                                                                                                                     cgcgGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgat                  <  2:250380‑M1/146‑131 (MQ=255)
                                                                                                                                      gcgGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgcca              >  5:305179‑M1/1‑15 (MQ=255)
                                                                                                                                      gcgGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgcca              >  5:151643‑M1/1‑15 (MQ=255)
                                                                                                                                      gcgGGTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgcca              >  8:289600‑M1/1‑15 (MQ=255)
                                                                                                                                        gggTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatt            <  4:183271‑M1/149‑137 (MQ=255)
                                                                                                                                         ggTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccattt           >  8:21743‑M1/1‑12 (MQ=255)
                                                                                                                                         cgcaagcccgcttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagagttcactcttctatacgtggtcacagcaagctctgccgacag                                >  6:83035‑M1/7‑12 (MQ=255)
                                                                                                                                          gTGAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttg          >  8:54273‑M1/1‑11 (MQ=255)
                                                                                                                                          gTGAACCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttatatacgtggtcacagcaagctctgcagacagggaataacgccgatgacatttg          >  8:307454‑M1/1‑11 (MQ=255)
                                                                                                                                            gAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg        >  7:212303‑M1/1‑9 (MQ=255)
                                                                                                                                            gAACCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg        >  2:285584‑M1/1‑9 (MQ=255)
                                                                                                                                             aaCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc       <  2:27160‑M1/149‑142 (MQ=255)
                                                                                                                                             aaCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc       <  1:289249‑M1/149‑142 (MQ=255)
                                                                                                                                             aaCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg        <  5:59102‑M1/148‑141 (MQ=255)
                                                                                                                                              aCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc       >  5:63686‑M1/1‑7 (MQ=255)
                                                                                                                                              aCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg                               <  4:314798‑M1/124‑118 (MQ=255)
                                                                                                                                              aCCCGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg                               >  3:314798‑M1/1‑7 (MQ=255)
                                                                                                                                               cccGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggcca     >  2:30757‑M1/1‑6 (MQ=255)
                                                                                                                                               ccagcttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggcca     >  1:192861‑M1/4‑6 (MQ=255)
                                                                                                                                                ccGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccac    >  1:18436‑M1/1‑5 (MQ=255)
                                                                                                                                                ccGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccac    >  2:37631‑M1/1‑5 (MQ=255)
                                                                                                                                                ccGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccac    >  1:148472‑M1/1‑5 (MQ=255)
                                                                                                                                                cagctgctatcaaacaacctataacccactgtgctgtctagcgaaaaacacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgggcacagcaagctgtgccgacagggattaacgccgatgccatttgg         <  7:166539‑M1/142‑140 (MQ=255)
                                                                                                                                                 cGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact   <  2:157429‑M1/149‑146 (MQ=255)
                                                                                                                                                 agcTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact   <  7:220237‑M1/148‑146 (MQ=255)
                                                                                                                                                 agcTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatt            >  4:19615‑M1/2‑4 (MQ=255)
                                                                                                                                                 agcTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatt            <  3:19615‑M1/139‑137 (MQ=255)
                                                                                                                                                  gCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgtgtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccact  <  1:291285‑M1/149‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
ATCTATTACGGCTTGTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATA  >  NC_002947/2937539‑2937833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.