New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5903771 =	58 (0.940)	3 (0.060)	3/234	NT	6.0%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903831 =	43 (0.790)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease

ATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGC  >  NC_002947/5903623‑5903913                                                                                                                                                     |                                                                                                                                                ggtacttcagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacg                                                                                                                                                 <  6:357711‑M1/1‑1 (MQ=255)  gtacttcagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGc                                                                                                                                                >  6:390684‑M1/148‑149 (MQ=255)  gtacttcagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGc                                                                                                                                                >  8:292941‑M1/148‑149 (MQ=255)   tacttcagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGcc                                                                                                                                               >  5:283621‑M1/147‑149 (MQ=255)      cTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGc                                                                                                                                            <  6:313354/149‑1 (MQ=255)        cagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGc                                                                                                                                            >  5:357711‑M1/142‑147 (MQ=255)           ccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCca                                                                                                                                       <  7:291844‑M1/11‑1 (MQ=255)            cgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCcac                                                                                                                                      >  3:380339‑M1/138‑149 (MQ=255)             aGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                                     <  7:30307/149‑1 (MQ=255)             aGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCca                                                                                                                                       >  3:240662/1‑147 (MQ=255)               gAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAgg                                                                                                                                   <  4:325443/149‑1 (MQ=255)               caggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAgg                                                                                                                                   >  1:335437‑M1/135‑149 (MQ=255)                   ccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAggg                                                                                                                                  <  2:4359‑M1/16‑1 (MQ=255)                   ccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAggg                                                                                                                                  >  1:4359‑M1/131‑146 (MQ=255)                   ccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAgg                                                                                                                                   >  4:1627‑M1/131‑145 (MQ=255)                   ccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAgg                                                                                                                                   <  3:1627‑M1/15‑1 (MQ=255)                   agTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTc                                                                                                                               <  8:45007/149‑1 (MQ=255)                     gaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAg                                                                                                                                    <  6:180939‑M1/14‑1 (MQ=255)                     gaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAg                                                                                                                                    >  5:180939‑M1/129‑142 (MQ=255)                                tGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCATAAGTATCAGTGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCGCACAGGGCTCACCACAACCCTGa                                                                                                                  <  2:149306/149‑1 (MQ=255)                                 gTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTg                                                                                                                   >  4:60739/1‑147 (MQ=255)                                 gTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCCCTCCCACACGGCTCACCAACACCCTg                                                                                                                   >  3:181845/1‑147 (MQ=255)                                  tAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGaa                                                                                                                 <  5:126141/148‑1 (MQ=255)                                  tAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAg                                                                                                                >  5:281284/1‑149 (MQ=255)                                       cGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCGCATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgt                                                                                                           <  6:227616/149‑1 (MQ=255)                                              ttgttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAAcccg                                                                                                                    >  2:188352/1‑132 (MQ=255)                                                 ttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCtg                                                                                                >  1:342790/1‑149 (MQ=255)                                                 ttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCt                                                                                                 <  4:168139/148‑1 (MQ=255)                                                  ggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCtgt                                                                                               >  2:196845‑M1/100‑149 (MQ=255)                                                    ccAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTgg                                                                                             <  3:60739/149‑1 (MQ=255)                                                    ccAATACCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTgg                                                                                             <  6:193296/149‑1 (MQ=255)                                                     gatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCtgtg                                                                                              >  5:305516‑M1/97‑147 (MQ=255)                                                     gatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCtgtg                                                                                              <  6:305516‑M1/51‑1 (MQ=255)                                                      aaTCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGa                                                                                           <  2:342790/149‑1 (MQ=255)                                                      aaTCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGa                                                                                           <  1:69132/149‑1 (MQ=255)                                                        tCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGC‑GAGGTCCCTGTGGGAGc                                                                                         <  6:281284/149‑1 (MQ=255)                                                         cccTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgt‑g                                                                                                         <  6:130074/132‑1 (MQ=255)                                                         cccTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgt‑g                                                                                                         >  5:130074/1‑132 (MQ=255)                                                            ttGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgt                                                                                                           >  8:209306/1‑128 (MQ=255)                                                            ttGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgt                                                                                                           <  7:209306/128‑1 (MQ=255)                                                              gAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGc                                                                                     <  4:240662/147‑1 (MQ=255)                                                               aGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTg                                                                                  <  5:275947/149‑1 (MQ=255)                                                               aGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGG‑ACCTCACAGCCTTCAGGGTTGTGGTGAGCCCTGTGGGAGCGGGcat                                                                                   <  2:33184/148‑3 (MQ=17)                                                               aGGGCTGGATTGGTCAGAAGTATCAGGGACTACCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGt                                                                                   <  2:111508/148‑1 (MQ=255)                                                                  gCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTGACCACAACCCTGGAGGCTGT‑GAGGTGCCTGTGGGAGCGGGCGTGccc                                                                               >  8:238459/1‑149 (MQ=255)                                                                      gATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCcgcg                                                                            >  7:225811/1‑148 (MQ=255)                                                                        ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                         <  8:225811/149‑1 (MQ=255)                                                                           gTCAGAAGTATCAGGGACTATCCACATTGGGTTGCGGTTTGGCGTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                       <  2:101286/148‑1 (MQ=255)                                                                            tCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATTCCCGCTCCCACAGGGCGCCCCACAACCCAGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGc                                                                     >  5:221945/1‑149 (MQ=255)                                                                            tCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATTCCCCCTCCCACACGGCTCACCACAACCCGGAAGGGGGT‑GAGGTCCCAGTGGGCGCGGGCGTGCCCGCGAAAGGGc                                                                     >  5:296341/1‑149 (MQ=255)                                                                            tCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGc                                                                     >  3:290876/1‑149 (MQ=255)                                                                              aGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCGGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGc                                                                     >  4:359457/1‑147 (MQ=255)                                                                                 aGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGt                                                                <  3:359457/149‑1 (MQ=255)                                                                                              aTCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCcgc                                                                             <  5:286690/123‑1 (MQ=255)                                                                                              aTCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCGGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCcgc                                                                             >  6:286690/1‑123 (MQ=255)                                                                                               tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCCCAACCCTGAAGGCGGT‑GAGGTCCCGGTGGGAGCGGGCGTGCCCGCGCAAGGGCCCGGTCAGGCCGACGCacc                                                  >  4:122810/1‑147 (MQ=38)                                                                                               tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCGCCCACAGGGCGCACCACCACCCGGAAGGCGGT‑GAGGTGGCGGTGGGGGCGGGCGTGCCCGCGAAAGGGCCACGGCAGGCCGACGCAGc                                                  >  4:85896/1‑149 (MQ=255)                                                                                                ccACTTGGGGATGCGGTATGGCTTTTAATCGGGGCTGGCGCCTTCGCGGGCATGCCCGCTCCCACTGGGCGCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGGGTGCCCGCGAAAGGGCCAGGTCAGGCCGGCGCAggt                                                 <  6:296341/149‑3 (MQ=38)                                                                                                ccACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAg                                                   <  8:352356/147‑1 (MQ=255)                                                                                                ccACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAg                                                   >  7:352356/1‑147 (MQ=255)                                                                                                           tGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACCGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGCGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACgccgcccc                                               >  1:206626/1‑138 (MQ=255)                                                                                                           tGCGGTATGCCTTTCAACCGGTGCTGGCCCCTTCGCGGGCTTGCCCGCTCCCACCGGGCTCACCACAACCCTCACGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCAc                                               <  2:206626/140‑1 (MQ=37)                                                                                                                tATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGGTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                 >  5:338459/1‑149 (MQ=255)                                                                                                                  tGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCGGAAGGCTGT‑GAGGTCCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCCCCTGCGCCGGgcgcgt                                >  3:11540/1‑146 (MQ=255)                                                                                                                     cTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGAcc                            >  3:33094/1‑149 (MQ=255)                                                                                                                            tCGGTGCTGGAGCCTTCGCGGGCATGCCCGCGCCCCCCGGGCGCACCACAACCCGGAACGCTGT‑GAGGTGCCGGTGGGCGCGGGCGTGGCCGCGCAAGGGCCCCGTCAGGCCGCCGCCGCCACCTGCGCCGGGCGCGTGACCTGCGGCt                     >  6:122742/1‑149 (MQ=255)                                                                                                                             cGGTGCTGGCGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAgg                                                                 <  3:134997/104‑1 (MQ=255)                                                                                                                                   tGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCGGT‑GAGGTCCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGc              >  6:375415/1‑149 (MQ=255)                                                                                                                                        ccTTCGCGGGCATGCCCGCTCCCACTGGGCGCACCACAACCCTGAAGGCGGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg         <  6:221945/149‑1 (MQ=255)                                                                                                                                        ccTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg         <  4:290876/149‑1 (MQ=255)                                                                                                                                         cTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGc        >  2:265675/1‑149 (MQ=255)                                                                                                                                          ttCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCt       >  8:63275/1‑149 (MQ=255)                                                                                                                                          ttCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTCCCCGCGAAAGCGCCAGGTCCGGCCGCCGCAGCCACATGCGCCGGGCGCTTGACCTGCGGATGCGAAACGTTGGCt       >  8:258649/1‑149 (MQ=38)                                                                                                                                             gcgGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTg      >  6:190684/1‑147 (MQ=255)                                                                                                                                               gggCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgcagc  <  7:238459/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                ATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGC  >  NC_002947/5903623‑5903913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.