| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5914157 = | 36 (0.580) | 7 (0.140) | 7/210 | NT | 28.9% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | 5914253 = | 6 (0.120) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGA > NC_002947/5914013‑5914244 | cgtgctgactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggccgcc > 4:217705‑M1/145‑148 (MQ=255)aTCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGcc > 1:335857/1‑148 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCct < 5:373149/149‑1 (MQ=255) ctgactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCtt < 8:1794‑M1/9‑1 (MQ=255) ctgactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCtt > 7:1794‑M1/141‑149 (MQ=255) aCATCTTCGTCGCTGGCAAGGAAAGCGAGCGGGAAGAGTTCGAGCACTCGATCGCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCGCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCtt < 8:109824/149‑1 (MQ=39) aCATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCctct > 4:141497/1‑148 (MQ=255) aCATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCtt > 3:324006/1‑149 (MQ=255) gactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggtCGCCCTCTTcg < 1:225769‑M1/11‑1 (MQ=255) actacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTc > 1:323222‑M1/138‑147 (MQ=255) ctacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTcgcg > 4:14863‑M1/137‑149 (MQ=255) ctacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTcgcg > 2:312759‑M1/137‑149 (MQ=255) ttCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCgg > 8:280578/1‑149 (MQ=255) ttCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCgg > 6:211676/1‑149 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGGACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCggg < 4:215212/148‑1 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgc < 5:175617/145‑1 (MQ=255) cgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCggg > 1:180173‑M1/134‑148 (MQ=255) cgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCgg > 8:104779‑M1/134‑147 (MQ=255) gcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCgggcgtg < 2:152049‑M1/19‑4 (MQ=255) cactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGc > 5:53561‑M1/130‑149 (MQ=255) gcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGTGGGCACGCCCGCTc < 1:152281‑M1/26‑1 (MQ=255) gcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTc > 7:353418‑M1/124‑149 (MQ=255) cactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCGTGCccgcgaa > 1:152049‑M1/123‑146 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGATTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTccc > 2:4725/1‑149 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCa < 7:264345/149‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCa < 5:171034/149‑1 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑gg < 2:335857/149‑1 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑gg < 2:263031/149‑1 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑gg < 5:211676/149‑1 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑gg < 3:141497/149‑1 (MQ=255) gagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGaa < 8:87870/149‑1 (MQ=255) gagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGaa < 8:28548/149‑1 (MQ=255) aGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGaa < 6:116578/149‑1 (MQ=255) gccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGc < 5:141448‑M1/53‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCNTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCtgt < 1:124004/148‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCa < 5:22839/122‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCa > 6:22839/1‑122 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCtgt < 7:280578/148‑1 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGa < 8:264352/144‑1 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGATTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCACGGGTAATTTCGAAGGCTGAAGCCtgt < 1:4725/143‑1 (MQ=255) ccTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtg > 4:186368/1‑149 (MQ=255) cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgt < 3:186368/149‑1 (MQ=255) ctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggtCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGa > 2:225769‑M1/78‑149 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCTTCTTCGCGGGCACGCCCGCTc < 3:105844/99‑1 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCTTCTTCGCGGGCACGCCCGCTc > 4:105844/1‑99 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCggg < 4:324006/149‑1 (MQ=255) gcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc > 6:141448‑M1/72‑149 (MQ=255) ggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGTGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGt > 2:152281‑M1/70‑149 (MQ=255) cTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCcgc < 1:72627/149‑1 (MQ=255) tGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGc < 6:263911/82‑1 (MQ=255) tGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGc > 5:263911/1‑82 (MQ=255) gCATACAGTGTAAACGAAAACGCCGCCCCTCAAGGGCGCCGATTTTGTTTGAGACCGGTCTCGCCCTCATCGCGGGCACGACCCATCCCCCA‑CGGTAAATTCGAAGGCAGAAGCCTGTGACTAACCTTTGGGAGCCGGCGTGcccagcc > 2:294788/1‑145 (MQ=255) tgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGaa < 6:334678/97‑1 (MQ=255) tgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGaa > 5:334678/1‑97 (MQ=255) agcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCg > 7:80140‑M1/44‑118 (MQ=255) agcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCg < 8:80140‑M1/75‑1 (MQ=255) ggcgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGa < 7:309395/112‑1 (MQ=255) cctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgg > 6:23258‑M1/16‑85 (MQ=255) | ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCA‑GGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGA > NC_002947/5914013‑5914244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |