New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6019270	49 (0.790)	5 (0.100)	5/220	NT	10.9%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6019300	41 (0.800)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase

GGCACCCGTCAGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATC  >  NC_002947/6019122‑6019415                                                                                                                                                     |                                                                                                                                                   ggCACCCGTCAGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGG                                                                                                                                                    >  1:213477‑M1/1‑149 (MQ=255)     cccGTCAGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGt                                                                                                                                                <  4:48429/149‑1 (MQ=255)     cccGTCAGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGt                                                                                                                                                <  1:93222/149‑1 (MQ=255)           aGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGcaca                                                                                                                                           <  5:315561/148‑1 (MQ=255)            gTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGaacaccaccgc                                                                                                                                         >  7:247148‑M1/1‑138 (MQ=255)            gTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGc                                                                                                                                         >  4:251208/1‑149 (MQ=255)              tCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCtt                                                                                                                                       >  8:51688/1‑149 (MQ=255)                   ggCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCCTGCACAGCTTTCaa                                                                                                                                   >  6:248439/1‑148 (MQ=255)                    gCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCaaaa                                                                                                                                 <  6:56763/149‑1 (MQ=255)                       aGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑g                                                                                                                             <  7:285410/149‑1 (MQ=255)                         aCGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑ggt                                                                                                                           <  5:237258/149‑1 (MQ=255)                           ggTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑ggtgg                                                                                                                         >  3:364440/1‑149 (MQ=255)                                ttGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCa                                                                                                                                    <  4:78446/134‑1 (MQ=255)                                ttGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCa                                                                                                                                    >  3:78446/1‑134 (MQ=255)                                    ggCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgt                                                                                                                 >  7:85786‑M1/1‑114 (MQ=255)                                     gcgcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCaaa                                                                                                                                  >  7:76199/1‑131 (MQ=255)                                     gcgcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCaaa                                                                                                                                  <  8:76199/131‑1 (MQ=255)                                     gcgcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtg                                                                                                               <  7:54485‑M2/149‑7 (MQ=255)                                       gcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑g                                                                                                                             >  3:262995/1‑133 (MQ=255)                                       gcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑g                                                                                                                             <  4:262995/133‑1 (MQ=255)                                        cAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtggga                                                                                                             <  8:70825‑M1/149‑40 (MQ=255)                                         aGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggag                                                                                                           >  8:54485‑M2/1‑139 (MQ=255)                                         aGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggag                                                                                                           >  4:30384‑M2/1‑139 (MQ=255)                                          gggCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagc                                                                                                           <  8:247148‑M1/149‑42 (MQ=255)                                          gggCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagc                                                                                                           <  8:85786‑M1/149‑42 (MQ=255)                                            gcgtGGAGGGCGATCAGGGCGCGGGCGGGACGCATTGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGGTTGCCCGCTCCCACAGGTCGGGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCgg                                                                                                        <  7:338687/146‑1 (MQ=39)                                            gCCTGGTGGTCGATGATGGCGCGGGCGGGAGGCTTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCGACAGGTCGTGCACATCTTTCATAAGC‑GGTGGTGTTcctgtgggagcg                                                                                                         >  7:31557‑M2/1‑136 (MQ=255)                                            gCCTGGAGCTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTGGAAATCGGGGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgg                                                                                                        >  8:336818‑M2/1‑136 (MQ=255)                                                ggAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGAACACCACCGCTTTTGAAAGC‑TGTGCACGAcctgtgggagcgggcaa                                                                                                    >  3:296367‑M2/1‑132 (MQ=255)                                                 gAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaa                                                                                                    >  5:34587‑M2/1‑131 (MQ=255)                                                  aGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTCAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAACC‑GGTGGTGTTcctgtgggagcgggcaagc                                                                                                  >  5:124074‑M2/1‑130 (MQ=255)                                                      cGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaa                                                                                                    >  5:127630‑M2/1‑126 (MQ=255)                                                      cGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaa                                                                                                    <  6:127630‑M2/143‑18 (MQ=255)                                                           aGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTGCTGTGGGAGCGGGCAAGCCCGCAAATg                                                                                         >  5:22666/1‑149 (MQ=255)                                                            gggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATgg                                                                                        >  2:295130/1‑149 (MQ=255)                                                             ggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCaa                                                                                            >  2:100936/1‑144 (MQ=255)                                                             ggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGACGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCaa                                                                                            <  1:100936/144‑1 (MQ=255)                                                              gcgcGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGc                                                                                      <  8:279814/149‑1 (MQ=255)                                                              gcgcGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGc                                                                                      <  3:73194/149‑1 (MQ=255)                                                                                gcggcgGCCTTATGGGGGGTCGGGTTGAACTCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACCGGTCGTGCACAGCTTTCACAAGC‑GGTGGGGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTAct                                                                     <  4:306992/148‑1 (MQ=38)                                                                                      gCCTTATGGGGGTTCGGGTTTAATTCGGTGGGGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTg                                                              <  4:251444/149‑1 (MQ=255)                                                                                               tggtTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCCCAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcgc                                                     <  2:88209/149‑1 (MQ=255)                                                                                                   tCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCtt                                                 >  7:275817/1‑149 (MQ=255)                                                                                                      ggTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGc                                              >  5:6037/1‑149 (MQ=255)                                                                                                      ggTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGGGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGc                                              <  7:51688/149‑1 (MQ=255)                                                                                                              tCGGGGGTTTATTATGCGCGGGTTTGCCCGCTCCCACTGGTCGTCCACTGCTTTAAAACGG‑GGTGGTGTTCCTGGGGTTGCGGGAAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAACCGGCGCGCTTTGCCCGTGCtt                                      <  4:364440/149‑1 (MQ=255)                                                                                                                 gtggtgGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGc                                   >  7:184061/1‑149 (MQ=255)                                                                                                                           attCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcg                                                      >  6:203357/1‑120 (MQ=255)                                                                                                                           attCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcg                                                      <  5:203357/120‑1 (MQ=255)                                                                                                                            ttCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCgg                         <  1:295130/148‑1 (MQ=255)                                                                                                                            ttCGCGGGCTTGCCCGCGCCCACAGGTGGTGGCCAGCTTTAAAAAGG‑GGTGGTGTTTCTGTGGGAGCGGGCAAGCCCGCAAATTGGGCGGCACAGGCGGTTAATGCTGGTTAGCCGGCGCGCTTTGGCCGTGGTTGGCCACTTACCGGc                        >  4:364923/1‑149 (MQ=255)                                                                                                                             ggtctggCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCt                       <  1:209031/144‑1 (MQ=255)                                                                                                                               gcgGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTAt                     <  8:275817/149‑1 (MQ=255)                                                                                                                               gcgGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTAt                     >  8:43203/1‑149 (MQ=255)                                                                                                                                  ggCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGc                  <  6:95601/149‑1 (MQ=255)                                                                                                                                   gCTTGCCCGCTCCCACAGGaacaccaccggttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttgaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacct                  >  5:124074‑M1/1‑19 (MQ=255)                                                                                                                                    cTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGc                                        >  8:110398/1‑125 (MQ=255)                                                                                                                                    cTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGc                                        <  7:110398/125‑1 (MQ=255)                                                                                                                                     ttGCCCGCTCCCACAGGtcgtgcacagctttcaaaagcggtggtgttcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctcc                >  3:296367‑M1/1‑17 (MQ=255)                                                                                                                                     ttGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctc                 >  5:34587‑M1/1‑17 (MQ=255)                                                                                                                                     ttGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcg                      >  5:127630‑M1/1‑17 (MQ=255)                                                                                                                                     ttGCCCGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcg                      <  6:127630‑M1/143‑127 (MQ=255)                                                                                                                                     ttGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCa                >  7:230727/1‑148 (MQ=255)                                                                                                                                        cccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCg                          >  1:15033/1‑135 (MQ=255)                                                                                                                                        cccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCg                          <  2:15033/135‑1 (MQ=255)                                                                                                                                        cccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAAc            <  2:213477/149‑1 (MQ=255)                                                                                                                                         ccGCTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccacccccgatttccacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgagctccaggc            >  8:336818‑M1/1‑13 (MQ=255)                                                                                                                                         ccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACg           >  5:107381/1‑149 (MQ=255)                                                                                                                                          cGCTCCCACAGGaacaccaccgcttatgaaagatgtgcacgacctgtcggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctaagcctcccgcccgcgccatcatcgaccaccaggc            >  7:31557‑M1/1‑12 (MQ=255)                                                                                                                                           gcccccACAGGCCTTCCACCGC‑TTCAAAACCGGGGGGTGTTCGTGTGGTTGGGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACggg         <  3:364923/146‑1 (MQ=255)                                                                                                                                           gCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccc         <  8:247148‑M2/149‑109 (MQ=255)                                                                                                                                           gCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccc         <  8:85786‑M2/149‑109 (MQ=255)                                                                                                                                            cTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccct         >  4:30384‑M1/1‑10 (MQ=255)                                                                                                                                            cTCCCACAGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccct         >  8:54485‑M1/1‑10 (MQ=255)                                                                                                                                            cTCCCACAGGTCGTCCACAGCTTTCAAAAGC‑GGGGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGTGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGga        <  6:22666/149‑1 (MQ=255)                                                                                                                                             tCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccctg       <  8:70825‑M2/149‑111 (MQ=255)                                                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga      >  1:339137/1‑148 (MQ=255)                                                                                                                                                cacaGGaacaccaccgcttttgaaagctgtgcacgacctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccctgcgc     <  7:54485‑M1/149‑144 (MQ=255)                                                                                                                                                cacaGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTccc                           >  6:225551/1‑126 (MQ=255)                                                                                                                                                cacaGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTccc                           <  5:225551/126‑1 (MQ=255)                                                                                                                                                 acaGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccctgcgcc   >  7:85786‑M2/1‑35 (MQ=255)                                                                                                                                                 acaGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGatat   >  6:317408/1‑149 (MQ=255)                                                                                                                                                 acaGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGatat   >  1:165200/1‑149 (MQ=255)                                                                                                                                                  caGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATc  >  1:86706/1‑149 (MQ=255)                                                                                                                                                   aGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATc  >  6:182395/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GGCACCCGTCAGTTCACGGGCCAGACGGTAGTTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGC‑GGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATC  >  NC_002947/6019122‑6019415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.