New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 142267	74 (1.190)	4 (0.070)	4/258	NT	6.4%	coding (211/822 nt)	PP_0134	hypothetical protein
	?	NC_002947	= 142331	45 (0.750)					coding (275/822 nt)	PP_0134	hypothetical protein

GATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAG  >  NC_002947/142192‑142472                                                                                                                                            |                                                                                                                                              gATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATg                                                                                                                                       <  5:387377/148‑1 (MQ=255) gATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATg                                                                                                                                       <  3:218796/148‑1 (MQ=255) gATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATg                                                                                                                                       <  6:336012/148‑1 (MQ=255)  aTTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGcc                                                                                                                                     >  2:325944/1‑149 (MQ=255)   ttCATTTCGCATCAAGGTTGAAGTGGCCGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGccc                                                                                                                                    <  6:69962/149‑1 (MQ=255)   ttCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGccc                                                                                                                                    <  6:173111/149‑1 (MQ=255)       tttCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACt                                                                                                                                >  7:357195/1‑149 (MQ=255)        ttCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACACGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtg                                                                                                                               >  8:346932/1‑149 (MQ=255)          cGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtgg                                                                                                                              <  4:255270/148‑1 (MQ=255)           gCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTTGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtggtg                                                                                                                            <  5:275328/149‑1 (MQ=255)           gCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtggtg                                                                                                                            <  8:108392/149‑1 (MQ=255)            cATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtggtg                                                                                                                            >  2:143231/1‑148 (MQ=255)            cATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtggtg                                                                                                                            >  6:159185/1‑148 (MQ=255)             aTCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACtggtg                                                                                                                            >  7:3138/1‑147 (MQ=255)                aaGGTGGAAGTGGACGGCAAGCAGGCGCGGCTGTCCGGTGAGGGGGAGACCGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGGGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGc                                                                                                                        <  2:378378/148‑1 (MQ=255)                 aGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGt                                                                                                                      >  3:185035/1‑149 (MQ=255)                          tGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAg                                                                                                             >  1:40120/1‑149 (MQ=255)                              cGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGc                                                                                                         >  4:74665/1‑149 (MQ=255)                                     cAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTa                                                                                                  <  2:105812/149‑1 (MQ=255)                                      aGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTAc                                                                                                 <  8:3138/149‑1 (MQ=255)                                        gcgcGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTTCGTGCCTACGc                                                                                               >  4:97749/1‑149 (MQ=255)                                          gcgGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTCCCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGccc                                                                                             >  4:43424/1‑149 (MQ=255)                                             gCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAgc                                                                                          <  6:142029/149‑1 (MQ=255)                                                     gTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTggag                                                                                  <  8:357195/149‑1 (MQ=255)                                                        aGGTGGATAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGAc                                                                               <  5:281422/149‑1 (MQ=255)                                                        aGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGAc                                                                               <  4:120893/149‑1 (MQ=255)                                                            ggAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAgctcgacctcgttctccacctcaccggaaagccgcgcctgcttgccgtccacttcaaccttgatgcg                                                                            <  5:86858‑M2/148‑68 (MQ=255)                                                             gagaACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGACCCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGAc                                                                          >  5:254470/1‑149 (MQ=255)                                                             gagaACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGAc                                                                          >  1:215847/1‑149 (MQ=255)                                                                   gAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTggc                                                                    <  4:90054/149‑1 (MQ=255)                                                                       tCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAgctcgacctcgttctccacctcaccggaaagccgcgcctgcttgccgtccacttcaaccttgatgcgaaatgaatcaag                                                                <  2:332841‑M2/149‑80 (MQ=255)                                                                              gCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAgctcgacctcgttctccacctcaccggaaagccgcgcctgcttgccgtccacttcaaccttgatgcgaaatgaatcaagcatgcgg                                                         >  6:86858‑M2/1‑63 (MQ=255)                                                                               cAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCg                                                        <  5:159185/149‑1 (MQ=255)                                                                                 gCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTg                                                      >  5:122538/1‑149 (MQ=255)                                                                                           gACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCtgtt                                            <  1:325944/149‑1 (MQ=255)                                                                                           gACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCtgtt                                            <  7:346932/149‑1 (MQ=255)                                                                                             cGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCtgttgt                                          <  2:215847/149‑1 (MQ=255)                                                                                                   ccGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCGCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGcc                                    <  6:319965/149‑1 (MQ=255)                                                                                                     gTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGt                                  <  3:212469/149‑1 (MQ=255)                                                                                                           cccGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTaccac                             <  6:122538/148‑1 (MQ=255)                                                                                                               gggCATCGAACAGGTAGAGAACCTGCTGCAgctcgacctcgttctccacctcaccggaaagccgcgcctgcttgccgtccacttcaaccttgatgcgaaatgaatcaagcatgcggttcagtgacaaggcggtttgcagggcgccttcc                        >  1:332841‑M2/1‑30 (MQ=255)                                                                                                                  cATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAgg                     >  7:358250/1‑149 (MQ=255)                                                                                                                    tCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCa                   >  5:207257/1‑149 (MQ=255)                                                                                                                      gAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCAc                  <  3:74665/148‑1 (MQ=255)                                                                                                                       aaCAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCt                <  2:40120/149‑1 (MQ=255)                                                                                                                         cAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCtat              <  3:43424/149‑1 (MQ=255)                                                                                                                            gTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAg            >  2:359593/1‑148 (MQ=255)                                                                                                                             tAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGaa          >  1:242588/1‑149 (MQ=255)                                                                                                                                agaACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTa       >  4:177879/1‑149 (MQ=255)                                                                                                                                  aaCCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACa     <  1:359593/149‑1 (MQ=255)                                                                                                                                    ccTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACa     >  7:111698/1‑147 (MQ=255)                                                                                                                                      tgctgcAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACagag  >  2:328643/1‑148 (MQ=255)                                                                                                                                            aGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGaaaa                       >  8:221817/1‑121 (MQ=255)                                                                                                                                            |                                                                                                                                              GATTCATTTCGCATCAAGGTTGAAGTGGACGGCAAGCAGGCGCGGCTTTCCGGTGAGGTGGAGAACGAGGTCGAGCGGCAGCTGGCCGAGGACGTGGCCCGTGCTACCCGGGGCATCGAACAGGTAGAGAACCTGCTGCAGCTCAATGCCCAACTGGTGGAGCGTCCGCAGGAGCTGCGTGCCTACGCCCAGCGCCTGGAGGACGTGACCCTGGCGGCGGTGATCCGTGCTCGGCTGTTGTGGAGCCGTACCACCGAAAAGGCACCTATAGAAGTACAGAG  >  NC_002947/142192‑142472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.